Oncorhynchus nerka (sockeye salmon): 115129609
Help
Entry
115129609 CDS
T07952
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115129609
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115129609
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115129609
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115129609
Peptidases and inhibitors [BR:
one01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115129609
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115129609
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Others
115129609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
DUF4502
Motif
Other DBs
NCBI-GeneID:
115129609
NCBI-ProteinID:
XP_029516016
LinkDB
All DBs
Position
LG5:25911430..25949703
Genome browser
AA seq
769 aa
AA seq
DB search
MGDRMALLLLVIATTALAVEVPTDGGMGLLAEPQVAMFCGKLNMHVDVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSVQNWCKKGRKQCRSHLHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTLNLHDYGMLLPCGIDRF
RGVEFVCCPSDRETDSTEQDEDDSDVWWGGAETDYTDNSMARGAAEPAESKQQQEEEETA
PAMVEEDDEEGQEVLDNDQDGDGDEDEEEDDDDDVIDERDDSEPTTNIAMTTTTTTTTES
VEEVVREVCWANAETGPCRAMLARWYFDHEEGRCAQFIYGGCGGNRNNFESEEYCLSVCS
NVMPTAAPSSPDAVDRYLETPGDDNEHAHFAKAKESLEAKHRERMSQVMREWEEAEREAK
SLPRADKKAVIQRFQEKVEALEQEAASERQQLVETHMARVEALLNDHRRLALESYLTSLQ
AEPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLTHLRVIEERM
NQSLGLLYKVPGVADDIQDQVELLQKEQADMAQQLSNLQSDVRVSYGNDALVPDSLPDST
RATLDLLPQEEDMDLDMGLDGLGFIHPESFNQVNTDNQVEPVDARPFPDRGFPTRPVSGL
KPEEIPELRMEAEERHSTGFEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLV
MLRKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccgtatggctttgttgctgctggttattgcgaccacggcgctagcagttgag
gtgccgacagatggtgggatgggcctgctggcggagccccaggtggccatgttctgtggg
aagctcaacatgcacgtggatgtccagagtggcaagtgggagtcagacccttccggcacc
aagagctgtatcggcaccaaggagggcatcctgcagtactgtcaggaggtataccctgag
ctgcagatcaccaacgtagtggaggccaaccagccagtcagcgtccagaactggtgcaag
aagggccgcaagcagtgccgcagtcatcttcacatcgtggtgccctaccgatgcctagtg
ggggagtttgtcagtgatgctctgctggttcctgataagtgcaagttcctgcaccaggag
cgcatggacatgtgtgagagccacctgcactggcacactgtggccaaagagtcctgtgga
gaccgaactttaaatctccacgactacgggatgctgttgccgtgcggcatcgaccgtttc
aggggggtggagtttgtgtgctgtccgtcagacagggagacggacagcactgagcaggac
gaggatgactcggatgtgtggtggggaggagccgagactgactacactgacaacagtatg
gcaaggggggcagcagagccagctgaatccaagcagcaacaagaagaggaggagacggcc
ccagccatggtagaggaagatgatgaggaggggcaggaggtgctggacaacgaccaggat
ggagacggggacgaggacgaggaggaggatgatgatgatgacgtcattgacgagcgcgac
gatagcgagcccaccaccaacatcgccatgactaccacgacaactactaccactgagtct
gtggaggaagtggtcagagaggtgtgttgggcgaatgcggagacgggcccatgccgtgcc
atgcttgcacgctggtactttgaccatgaggagggccgctgtgcccagttcatctatggc
ggctgcggtggcaaccgcaataactttgagtcggaggagtactgcctgtctgtatgcagc
aacgtcatgcccaccgccgcccccagctctcccgatgccgtggaccgttatctggagacg
cccggggatgacaatgaacacgcccacttcgccaaggccaaggagagcctggaggccaaa
caccgtgagaggatgtcccaggtgatgagggagtgggaggaggcagagcgggaggccaag
agtctacctcgtgctgataagaaggctgtcatccagcgtttccaggagaaggtggaggcc
ctggagcaggaggcagccagtgagaggcagcagctggttgagactcacatggcccgggtt
gaggccctgctcaatgaccatcgccgcctggccctggagagctacctgacctccctgcag
gccgaaccacccaggcctcgtcatgtgttcagcctattgaagaagtatgtccgtgcagag
cagaaggacagacagcacacccttaaacactttgagcacgtccgcatggttgaccccaag
aaggccgcacagatccgaccccaggttctgacccacctgcgtgtgattgaggagaggatg
aaccagtccctgggtctgctctacaaggtacccggagtggctgacgatatccaggaccaa
gttgagttgttgcagaaggagcaggcagatatggcccagcagctgtccaacctgcagagt
gacgtgcgggtgagctacggaaatgacgccctggtgcccgacagtcttccagacagcacc
agggctaccctggacctgctgccccaggaagaagacatggacctggacatgggcctggac
ggactgggcttcatccaccctgagagcttcaaccaggtcaacacagataaccaggttgaa
cctgtggatgcccgcccttttcctgatagaggctttccaacacgaccagtgtctggtctg
aagccagaggagatccctgagctcaggatggaggcagaggagaggcacagcaccggattc
gaggtgcaccaccagaaactggtgttctttgccgaggatgtcggctctaacaagggcgcc
atcatcgggctgatggtgggaggcgtcgtcatagcgaccgtcatcgtcatcaccctggtg
atgctgaggaagaagcagtacacgtccatccaccacggagtcgtcgaggtggatgcagca
gtcacccctgaggagcgccacctgtctaagatgcagcagaacggctatgagaaccccacc
tacaagttttttgagcagatgcagaactga
DBGET
integrated database retrieval system
