Oncorhynchus nerka (sockeye salmon): 115129639
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Entry
115129639 CDS
T07952
Name
(RefSeq) trafficking protein particle complex subunit 10-like isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129639
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115129639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_7
Motif
Other DBs
NCBI-GeneID:
115129639
NCBI-ProteinID:
XP_029516095
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Position
LG5:27470522..27491935
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AA seq
1269 aa
AA seq
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METHEETPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPKEPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWSSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAN
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKCPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRKRSSLLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFYQVILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAVQVEQLAATLHFSLEQGGARGRAGGTQRRTGQGDGVVLFPQGS
PLAGAGMGASLPPALELYEMQDRSPSDSSLNSTGVVCKNMHLLLRRHDSSASLDTPTAGA
LPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFVQSHIY
PVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYSVKKGDALQLSNTDSMPILH
SSCCSATILSSTGELVGERPLSVQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPPTPFKP
DIERLTNGEVRHQPKSHSQADSGMIHIDQKVSIDCPWSIYSTLISLTFYVPFKAKHSILS
AGKRKYIQVCLQNVSDTNFHLADPVLTERQPTIPVELLSFNGKTQQTVCSQQSVFCLWEM
RWVKHLPLCLQCAFSASFAPVSASDANTAFKPYRYEFQLDRVSTLYSLKAEILPSSGDQH
CRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCGKSSGV
VSMPVAASATHRVQMEVMPLFAGHLPFPNIKVFKYLPHSAVPAIQPDTDSCLENDTMSLL
DKGLDDQGDTASIRSRGSIHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLVLPVTD
DHVMEVNVT
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggagacccatgaagaaacgccaataatctacacaatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttccctctacacctctctggcacagcagttaccc
aaggagcccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctgcttcctaaggacggaaatagagccttgctc
accttccccttcctgcacatatactggacagactgttgtgacacagagatgtacaaggcg
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctgcacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtagacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtctgaccctctgaaggagtcatctcggtcccaggattcgtggagctccttc
ctgaccaagctgcgcaccttgctgctcatgtccttcaccaagaacctgggccgcttcgag
gatgacatgcgcacgctccgcgagaaacgcaccgagcccggctggagcttctgcgagtac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgct
ctggtccagtatgacgagctggacgctctcttcactcagtatgtcctcaattttggggct
ggagacggggccaactggctgggctcgttctgtgccccggtgaagcgctggagcgggctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgcggcgaggccaac
ctgctggacctgcgcagttacctcttctcccgccagtgcaccctgcttatcttcctccag
aggccctgggaggtcacccaacgagccctggagctgctgcacaattgtgtccaggagctg
cgcctgctcgaggtgtctgtggtccagggggcgttagactgctgggtgttcctcagctgt
ctggaagtgctgcacaggatcgagggctgctgcgaccgcgcccagctagaggccaactgc
tcccacactgtcggcctgtggacctacgccacagagaagctaaagtctctgggctacctg
tgtggcctggtggccgagaagtgccccacctccgaggacctaaaccgcaccgtagacctt
ctggctggcctgggggaagagagaccagagactgtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
catgctgcaatggagatgtacagagccataggcaggaagcgctcatccctgctcattgga
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagggcttcctt
gatgactctctgaggtcctacgtggcagaggggtggagcctgcaggtgactcataccagg
aagcagatggccgagtgtcagaagcttttgcagcagactgaagactacctgcagaccagt
gccttgctggcgggtgacgccaacctgacagaggaggagaggaagcacttctaccaggtg
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcattcgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgcgtacgctgcctgatgcctgtggccgtgcaggtg
gagcagctggctgccactctccatttcagcctggagcagggcggggcgaggggccgggcg
ggcggcacccagaggaggacaggccagggggacggggtggtcctgttcccccagggaagc
cccctagctggggccgggatgggcgcttcgctaccccccgcactggagctttatgaaatg
caggaccgcagcccgtcggacagctcactcaactccacgggggtggtgtgtaagaacatg
cacctgctgctgcggcgccacgacagctcagcctccctagacacgcccaccgccggggcc
ctcccagcagcggttgccgtggacgacggggcccagatgctgagggcacgcgacataacg
ctacagcccggcgacaacagcatcttgttcacggcccctactggagagccgggctcgtac
acgttacgtcagctgtgcgggagtgtagggagagtccagtttgtccagtctcacatctac
cctgtggtgcagtacgaggtctactcccaggagcctcagctcaccatcgagcccctctca
gacaacctgttggcaggcattccccagaaggtgaagttcaccatagcaacaggccactac
agtgtgaagaagggtgacgcgctgcagcttagcaatacagactccatgcccatcctccac
tctagctgctgctctgctaccatcctgtccagcacgggagagctcgtgggggagcgtcct
ctttctgttcagtcatcggagaaggtgaccagcatttccctgcccccaacccctccctac
cacaccctggagttccagctggaggtgctgtgccacatcccccccacccccttcaagccc
gacatcgagcgtctcaccaatggcgaggttcgccaccagcccaagagccacagtcaggca
gacagtggcatgatccacatcgaccagaaggtctccatcgactgtccttggtccatctac
tccacgctcatatccctcaccttctatgttcctttcaaagccaagcactcaatactctct
gctgggaaaaggaagtatatacaggtgtgtctccagaacgtgtccgacacaaacttccac
ctggcggacccggtcctcacagagcgccagcccacaatcccggtggagctgctctcattc
aatggtaaaacacaacagacggtgtgcagtcagcagtcagtcttctgcctgtgggagatg
cgttgggtcaaacacctcccgctgtgcctgcagtgtgcattctccgccagctttgcgccc
gtctccgcctctgacgcaaacacagccttcaaaccctaccgctacgagttccagctggac
cgggtctctaccctttacagcttgaaggccgagatcttgccgtcgtctggcgaccagcac
tgtcgcaccggcgccctctgtggcctcgaggtgtccatcacacggcaggcagagcccagc
gagactgaaggggaggaggaggagtctacggaaatagagggcctgaggaccaccaagctc
atgtatgaagtggtggacaacagcagtaactgggcggtgtgtggcaagagctcgggggtg
gtgtccatgcccgtggctgccagcgccacacacagggttcagatggaggtcatgcccctg
ttcgctgggcacctgcccttccccaacatcaaagtgttcaagtacctgccccacagtgcc
gtcccagccattcagccagacacagacagctgcttagagaacgacaccatgtccctgctg
gacaaaggtctggacgaccagggcgacacggccagcatccgtagccggggcagcatccac
tcggtgggcagtggggagcagcagaggggtctgcccatgccccggctggagcccttcagt
ccgggacaggtgttctattggagccaggggcggcaggtgctggtgctgcctgttactgac
gaccacgtgatggaggttaacgtcacatga
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