Oncorhynchus nerka (sockeye salmon): 115129648
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Entry
115129648 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 2-like
KO
K23560
zinc finger homeobox protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129648
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115129648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_6
Homeodomain
zf-C2H2_15
Csm1_N
zf-C2H2_2
zf-H2C2_5
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
115129648
NCBI-ProteinID:
XP_029516108
LinkDB
All DBs
Position
LG5:27970527..28055980
Genome browser
AA seq
1265 aa
AA seq
DB search
MKHEIMADGPRCKRRKQANPRRKNALNYENVMDTGSETEDEDKLLVSEEDGLLNGVCSPA
SLNNHDAGSPRVGQALTTKEDEDDDMRDSGVDHVWHDNDMLHASVDGTDEMKDDYDTLGP
DAPLQTVGNGTVKNVVDCTSEFEEFFAKRSKLQEESLSESHSHVVSIAEYLQRGDTAIIY
PEAPEGEELSRLGTPEAPETNGQEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIK
YRHEKNEENFACPLCNYTFAYRTQLERHMATHKPDRDQHQLLNQGAGNRKFKCTECGKAF
KYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLIAVNGRMRNNMKTG
SSPTSASSSPTNTAITQLRHKLENGNGNGKLLGHHQDQNNHHLNIKTEPLDFNDYKLMMA
SHGFSAPAPFMNGGMGGNSSPLGIHCSARSPMQHLGVGIEQQLLGYPSLSNNLSEVQKVL
QIVDNTVCRQKMDCKPEEISRLKAYMKELGNQIEEQKQGLTSQGGHQIGLPVISHNGATK
SIIDYTLEKVNEAKACLQSLTTDSKRQISTIKREKSNHMLDLGTEDKMHENNIMFTPFAC
QYCKEAFPGPIPLHQHERYLCKMNEEIKTVLQTSENLMPTKQGMFTEKHALLLSSMLSEK
SPINPYKDHMSVLKAYFAMNMEPNSEELLKISIAVGLPQEFVKEWFEQRKVYQYGTPRTP
PLRTTNGTTMQIWFXPQINHNHTPSKDSMAARSPVSLIKSNNRTCNRDHHITSPSIAELH
NNVNNCENQLRLMKANPFSGHTKHMGDHSKLDHQSRSSTPSPLNLSSTSSKNSQSSSYTP
NSLMSEDLNLNMNLSEQPLDLSLPKLMKEPKHAMTVKSRPKLNSINRHDHSSVPSPREHF
EEPLNLAYLKKEFEGRGQNHLNGDFNKSTSPLFGMNPFGAKPMYTSLPQQTAFPPATFMS
PMQASMPGLRPYPGLDQMGFLPHMAYTYATGAATFAEMQQQQRRKYQRKPGFQGELLDGT
ADYMSGLDDMTDSDSCLSRKKIKKTESGMYACDLCDKTFQKSSSLLRHKYEHTGKRPHQC
QICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERE
AAEREAREKGHLEPTELLLSRAYLQGMTPQGYPDLEDREGILREGGMNGGMRDRQKEVEG
TYAKIGRREEDFEEEEEESENKSMDTDPDTLRDEEENGEHSMDDSSFDGKTETKSDHEDN
MEDGM
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgagatcatggcggatggccccaggtgtaagaggcgaaaacaagccaaccca
agaaggaaaaacgcgttgaattacgagaatgtgatggacactggttccgagacagaggat
gaggacaagctgctggtatcagaggaggacggcctactcaacggggtgtgcagccctgcc
agcctgaataaccacgacgctggatccccgagggtgggccaggccctgacgacgaaggag
gatgaggacgatgacatgagggacagcggagtagaccatgtctggcacgacaacgacatg
ctgcacgcctcagtcgacggcactgatgaaatgaaagatgattatgacactttggggcct
gacgcccctcttcagacagttggaaacggtacggttaagaatgttgttgattgcacttca
gagtttgaggagttcttcgctaagcgtagtaagctccaggaggagagcctgagcgagagc
cacagccacgtggtcagcatcgctgagtacctgcagcggggcgacactgccatcatttac
ccagaagcacccgagggagaggagctgtcccgtctgggcacgcccgaagcgcctgaaaca
aacggccaggaggaaaatgacctgccacctggaactccagatgctttcgcccaactgttg
acctgcccctactgtgaccggggctacaagcgcttgacatcgctcaaggagcacatcaag
taccgccacgagaagaacgaagagaactttgcctgccccctgtgtaactacacgtttgcc
taccgcactcagcttgagcgacatatggccacgcacaagcccgacagagatcagcaccaa
ctgctgaaccagggggctggcaaccgcaagttcaaatgcacagaatgtggcaaggccttc
aaatacaagcaccatctgaaggaacacctgcggattcacagtggtgagaagccatacgaa
tgcccaaactgcaagaagcgcttctcccactcaggctcatacagctcacacatcagcagc
aagaagtgcatcggccttatagcagtcaacgggaggatgcgcaacaacatgaagacaggc
tcttcccctacatcagcctcgtcctcccccactaacaccgccatcacccagctgagacac
aagctagagaacggaaacggaaacggcaagctcctgggccaccatcaggaccagaacaac
caccacctgaacatcaaaacagaaccactagacttcaacgactacaaactcatgatggcc
tcccatggcttcagcgcacctgcgcccttcatgaacggagggatggggggaaatagcagc
ccgctagggatccactgctcagcccggagccccatgcagcacctgggggtggggatcgaa
caacagctccttggttacccgtccctgagcaacaacctgagcgaggtccaaaaggtgctc
cagatcgtggacaacactgtgtgcaggcagaagatggactgcaaaccggaggagatctcc
aggctcaaggcttacatgaaggagctcgggaaccagatcgaggagcagaaacagggactg
acgtcacaggggggtcaccagattggtctgccagtcatcagccataacggtgccacgaaa
agcatcatcgactacacattagaaaaagtgaacgaagccaaagcttgtctccagagcttg
accacggactcaaagagacaaattagcactatcaaacgcgagaaatccaaccacatgcta
gatttaggtacagaggataagatgcatgagaacaacattatgtttacaccctttgcttgc
caatactgcaaagaagccttcccaggtccaattcccttgcatcagcacgaacgttacctt
tgtaaaatgaatgaggagatcaagactgttctccagactagcgagaaccttatgcccaca
aaacaggggatgtttacagagaagcatgccctcctgctctcgtccatgctgtctgagaaa
agccccatcaacccgtacaaggaccacatgtcagtgctcaaggcctacttcgctatgaac
atggagcccaattcagaggaactactgaagatctccatagcagtcggccttcctcaggaa
ttcgtcaaagagtggttcgagcagaggaaagtttaccagtacggcaccccaagaactcca
ccacttagaacaacgaacggaacaaccatgcagatatggttctagccgcaaatcaaccac
aaccacactccctctaaagactcaatggcagctagatccccagtgtccctgatcaagtct
aataaccgtacctgcaaccgtgaccaccatatcacgtccccctccattgcagagctccat
aacaacgtcaacaactgtgagaaccagctcagactcatgaaagccaacccgttcagtgga
cacaccaaacacatgggtgaccactccaaattggaccaccagtcaaggagcagcacacct
tctcctttgaacctttcctccacatcttccaaaaactcccagagtagctcttatactcca
aacagcctgatgtctgaggacctgaacctcaacatgaacctgtctgaacaaccactggac
ctgtcactgccaaagctcatgaaggagcccaaacacgccatgaccgtgaagagcagacct
aaactaaacagtattaaccgccatgaccactccagtgttccctccccacgagaacacttc
gaagagccacttaacctggcctatctcaagaaggagtttgaaggcagaggccagaaccac
cttaatggagacttcaacaaaagtaccagccccttgttcgggatgaaccccttcggtgcc
aaacctatgtacacgtcgcttccgcaacagaccgcgttcccacctgccaccttcatgtct
ccgatgcaggccagcatgcctgggctgaggccgtacccagggctggatcagatgggcttc
ctaccacacatggcctacacttatgcaacaggagcagctacctttgctgagatgcagcag
cagcagaggagaaaataccagcgaaagcctggtttccagggggagctgctcgacggaaca
gccgattacatgtcaggactggatgacatgaccgattcagactcctgtctgtcccggaag
aagattaagaagacagaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccag
aagagcagttccctcctaagacacaaatatgaacacacaggtaaacggccacaccagtgt
caaatctgcaagaaggcattcaaacacaagcaccaccttatagaacattcacgactgcac
tctggcgagaaaccgtaccagtgcgacaagtgcggtaagcgcttctctcactccggctct
tactcccagcacatgaaccaccgctactcttactgcaagagggaggccgaggagagggag
gcggccgagagagaggcccgggagaagggccacctagagcccacagagctactattgagc
cgggcctacttacagggtatgactcctcagggctaccccgacctggaggaccgcgagggc
attctgagggagggcgggatgaacggaggcatgagagatcgccaaaaggaagttgaagga
acgtacgcgaaaataggacgtagggaagaggactttgaggaggaggaagaggagagcgag
aacaagagcatggacacagatccagacacgttgagggatgaggaggagaacggcgagcac
tcgatggacgatagttcttttgacgggaaaacagaaaccaaatcggatcacgaggacaac
atggaggatggcatgtaa
DBGET
integrated database retrieval system
