Oncorhynchus nerka (sockeye salmon): 115129676
Help
Entry
115129676 CDS
T07952
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115129676
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115129676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
115129676
NCBI-ProteinID:
XP_029516146
LinkDB
All DBs
Position
LG5:30043677..30106124
Genome browser
AA seq
734 aa
AA seq
DB search
MTEGRAGVKQPRNQPRFFTMEGDEEESMSSSSTDVKENRNLDNVVSSSKEGLGGEGAAHL
PNGGSAGCGGGRKRPLEEGNNGHHNNKYRPKKRKKMPGPILPKNALMQLNEIKPGLQYKL
LSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNSAEKALRSFVQFPNASEAHMAMGR
TLTVNTDFTSDQADFPDMLFNGFETPAPPEESFYLGSNGTNGSFSSLGLVEYPLLGNSGA
TGLSQSSLGLPLTASVPAFVSPAIAKNPVMILNELRPGLKYDFVSESGESHAKNFAMSVV
VDTQTFQGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREGLQLHLPQVLADAVS
GLVVDKFSELTDNFTSPHARRKVLAGIVMTTGTDVKEAQVICVSTGTKCINGEYMSDRGL
ALNDCHAEIIARRSLLRYLYAQLEHFLSNNREEQHKSIFTRCENKQGFRLKDNVQFHLYI
STSPCGDARIFSPHEAAFEDQGDRHPNRKARGQLRTKIESGEGTIPVKVSNTIQTWDGVL
QGERLLTMSCSDKIARWNVVGIQGSLMCYFTEPVYFSSIILGSLYHADHLSRAMYQRIAD
IEDLPQTFNLNRPLLSGISNAEARQPGKAPNFSVNWAVGDQGLEVINAMTGKDDLGRPSR
LCKHALYSRWVRLYCKLSQTLRIKGAKPSLYHDAKQAALEYHAAKQTLTKEFHKAGLGAW
VKKPIEQDQFSLQS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggtcgagctggtgtgaagcagccccgtaaccagccaaggttcttcaccatg
gagggagatgaagaagagagcatgagttccagcagcaccgacgttaaggaaaaccgcaac
ctggacaacgtggtctcctcctccaaggaggggttggggggtgagggggcagctcacctc
cctaatgggggcagtgcaggttgtggagggggcaggaagcgtcccttagaagagggtaat
aacgggcatcacaataacaagtacaggcccaagaagcgtaagaaaatgcccgggcccatt
ctgcccaaaaatgccctgatgcagctgaatgagatcaagcctggactgcagtacaagctg
ctgtctcagaccggtccggtccacgcgcccgtgttcgtcatgactgtcgaggtcaatggg
cagctgttcgagggctccggccccaccaagaagaaggctaagctcaactcggctgagaag
gctctgcggtcgttcgttcagttccccaacgcctccgaggcgcacatggcaatgggtcgg
acgctaacggtcaacacagactttacctccgaccaggctgacttcccagacatgttgttt
aatgggtttgagaccccggcccctccggaggagtccttctatctgggttctaacggtacc
aatggctccttcagctccctgggactagtagaataccccctgctagggaactcaggtgct
accggcctgagtcagtcctcgttaggcctaccactcaccgcctccgtcccggccttcgtc
tcccccgctattgccaagaaccctgtcatgatcctcaacgaactacgacccgggctaaag
tacgactttgtgtcagagagtggagagagccacgccaagaactttgccatgtccgtggtg
gtggacacacagacgttccaaggttcagggcgcaataagaagctggccaaggcccgggcg
gcgcaggctgctctctctgccctctttaacatgcaactggaccagacaccgtccagacag
cctatacccagagagggcctgcaactgcacctgccacaggttctagctgatgctgtgtcc
ggtctggtagttgacaaattcagtgagctgacggataacttcacatcccctcacgcacga
cggaaagtcctagcaggcattgtcatgacaacaggcaccgatgtcaaggaggcacaagtg
atctgtgtttccaccgggaccaagtgtataaacggcgagtacatgagcgaccgcggcctg
gctttgaacgactgccatgctgagatcattgctcgtcgttccctccttaggtacctgtac
gcacagctggaacacttcctcagtaacaacagagaggagcagcataagtcgatattcacg
aggtgcgagaacaagcagggcttccgtctgaaggacaacgtgcagttccacttgtacatc
agcacgtcgccctgcggagacgcacgcatcttctcaccccacgaggctgccttcgaggat
cagggagacaggcaccctaacaggaaggctcgtggtcagctgaggaccaagatagagtct
ggggaggggaccatccctgtgaaagtcagtaacaccatccagacctgggacggagtactg
cagggagagaggctgctcaccatgtcctgcagtgacaagattgccaggtggaacgtagta
gggatccagggctctctgatgtgttacttcacagagcccgtctacttctccagcattatc
ctgggcagcctgtaccacgcagaccacctctccagagccatgtaccagaggatcgctgac
attgaggacctgcctcagacgttcaacctcaaccggccacttctgagcggaataagcaac
gcagaagcacggcaaccgggtaaagcgcctaacttcagtgtgaactgggctgtgggagac
caggggttggaggttatcaacgccatgacaggcaaggacgacttgggacggccctcgagg
ctctgcaagcacgccctctacagccgctgggtgcgcctatactgcaagctttcacagact
ctgagaatcaaaggtgccaaacccagcttgtaccatgacgccaaacaggcagcgttggag
taccatgctgccaagcagactctgaccaaggaattccacaaggcaggactgggagcctgg
gtcaagaagcctatcgaacaggaccagttctcactccagtcctga
DBGET
integrated database retrieval system
