Oncorhynchus nerka (sockeye salmon): 115129710
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Entry
115129710 CDS
T07952
Name
(RefSeq) lymphocyte antigen 75-like
KO
K06559
lymphocyte antigen 75
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115129710
04090 CD molecules [BR:
one04090
]
115129710
04091 Lectins [BR:
one04091
]
115129710
Pattern recognition receptors [BR:
one04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
115129710
CD molecules [BR:
one04090
]
Proteins
115129710
Lectins [BR:
one04091
]
C-Type lectins
Group 6: Mannose receptor family
115129710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
RicinB_lectin_2
MIR
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
115129710
NCBI-ProteinID:
XP_029516227
EnsemblRapid:
ENSONEG00000041735
LinkDB
All DBs
Position
LG5:31538515..31594413
Genome browser
AA seq
1768 aa
AA seq
DB search
MTLQATFYLCFLLFFCDKTICFGTCASTTYSGNDTFTIQHVSTGKCLVATSTSGTGVSGI
AGAKSGGSGFNVTLGECDVSRGSQWKWGSGHRLFHVGTSQCLGLEEKTKALSLFSCSPME
NTMLLWRCLDGAIYTVYQMGLTVTEGLVSAKRDSSDAWRRDESTDNICQRPMHIVHTTNG
TSTGEPCEFPFHYNGSWYHECLPDDQSPGLYWCSTTSDFDADKKMGYCLKHEEGCKALFD
GPEEGPCYEFVSQVAVTWQEALDSCRSQGADLLSVSSSEDQAFPILDVAHNSRPDRMWIG
LHQLDSSQGWQWSDGSPLNNVRWDNGMPHTSILRESDCGFMNSKNYYESEICDKKLPYIC
KKNVNVTQSVATEPLVYKSTICDEGWAPWNMFCYKLVMDEPKMFAQAENYCKTIGGGLVS
LHSLDSMEMISTQFHAGTPHAQRNQSRDVLGVWIGLNGTGNPAILSWVDETPVSFTYWDR
NHPIQPSGHSHCVYYFGESHGWRVGSCTQELPFMCQKKGEVNESSTTGCPPEGDWRRHGN
SCYKVDSKEVSFRDRCDLTINNRFEQAFINRLLAEEINVKRQCFWTGLQDIKTSGEYQWV
AQDGSETNVTYTNWGVFEPALAGGCAVMSTANPLGKWVVKNCTMFKAGSICKRDIAAPQP
LEPEPDPNLPCPDGWTSRPGISYCYKVFHEERLSRKRSWEEAERFCEALGAHLPSFNHPQ
EMKALHYVMRDSISDDRFFWVGLNRRNPAAGSWEWSDNRPVSMAIFPQEFHEDDEYNRGC
TAFKTLKGTLKSFFLFLMHEFPPLPFYATPFHCDVRLEWVCQIPRGKTPENPEWYNPGGH
HETSIFIDGNEFWFVMEPKLPYEEASLYCNSNGSKLAAPQSSNAAIQIHNNLPQMSAGKQ
SWWVDVRDAGHYFPIRLPLMQNYQATFLGRCTTISDKNIFPEYEYSCELQLPFVCERHNT
TAIETHPGEPHPNGLPCESGYLHFRDKCYVVITPLYVTFQHANEHCQSMRGTLLTITDQV
EQDFVTSLLPAQPRKTWIGLKLKQQDPEWVDDSPVSYLNFNPLLHGLRRPILVDFHDPET
MALCFFMFNDPSSAMMGSWDYTPCSNQQHVAICQHYADKPEEPQFQLEPFQVNNHTFKLL
QKNMTWHEALAECRNQNMDLASVADTLQQSVLTVHVTRARSPMWIGLFSADDGVHYRWTD
HSHTVFSRWSSEPTVGHCVFLDTDGFWKATECMEQLAGAICHVPHEENVTTHEDNAVNCP
HKSSGPNWIPFKNNCYTFQLASSRWEEFDKGQILQTCKKLAPDADILTIRNVVENEFVKE
QLLPFKDLVQFVWLGVFKDDNDNQMKWYDGTNVQYSNWVDGRPSFSASDEFMAGLNTDGV
WKIFTKKHHFSPFKQRSIVACKLDKDSKDQYNQLARDFERYGNLSYHVITRKLSWFQALE
ECGRGNGHLASVHGTRHNAHIELIAKRDGFPLWIGLSSQDASGSQSYEWSDGTKYHYSQA
GLSDTVVTSSSDPQSVCVYITPHGTWMRMDCNAKLDGAICYNTTITTPTQRSNLAAPQVA
NNCPQNSGSQNSGSKWVEHQDHCYAFDMTFYNYSVYSMEDAKSICERLDAQLLTIMTREE
NDFVSGYMADNPLITSRVWLGMDLDKQGQPVGWVDGSSLAFSNWETNGSASGVKTATQQN
PCAVMVSADGGIWSRVSCKDSHSRIVCKVPARSGSAPVVLVFFLVVLTSLLAAICFVVYK
KSRARFNSTVRYRRTIDDADSTSIMDAE
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgacactccaagcaacgttttacctatgttttttattattcttttgtgataaaacgatt
tgttttggaacttgcgcatcaactacatattccggtaacgacaccttcaccatacagcat
gtgagcacagggaagtgcctggtagctacgtccacgtctgggactggagtttccgggata
gcaggggctaagtctggagggtccgggttcaacgtgaccctgggggagtgtgacgtttcc
agggggtcccagtggaagtgggggtccggccaccgtctcttccacgtgggcacgtcccag
tgcttgggtctggaggagaagaccaaggccctgtctctgttcagctgtagccccatggag
aacaccatgctgttgtggcgctgcctggacggggccatctatacggtgtaccagatgggc
ctcacggtgaccgaagggctggtcagtgccaagcgcgactcctcagacgcctggaggagg
gatgagtcgaccgataatatctgccagcggccgatgcacattgtccacaccaccaatggg
acgtcaaccggggagccctgtgagtttcccttccactacaacggcagctggtaccacgag
tgcctccccgacgaccaatcacctggactatactggtgttccacaacctccgactttgac
gctgacaaaaagatgggatattgtttaaaacatgaggaaggctgcaaggccctgttcgat
ggccctgaggagggaccctgttatgagtttgtgtcccaggtcgcggtgacatggcaggaa
gcgctggactcttgtcgcagccagggagctgacctgctcagcgtctccagctcagaggac
caagccttccccatcttggacgtggcccataacagcaggccagacaggatgtggatcggc
ctacaccagctggactcgtctcagggctggcagtggtcagacggctcacccctcaacaac
gtgcgctgggacaacgggatgccacacacatcgatccttagggagtcagactgtggattc
atgaattcgaaaaactactacgagagtgagatctgcgataaaaaacttccctacatctgt
aagaaaaacgtcaacgtcacccagtcggtagcaacagagcctttggtgtataaatccacc
atatgtgacgagggctgggccccttggaacatgttctgttacaagctggtgatggatgaa
ccgaagatgtttgctcaggccgagaattactgtaagaccatcggaggaggcctggtcagt
ctacacagcctggacagcatggagatgatcagcactcagttccatgcaggtacaccgcac
gctcagagaaaccaatcacgagatgtgttgggcgtgtggatcggtctgaacgggacgggg
aacccagccatccttagctgggttgacgagacacctgtctccttcacctactgggacagg
aatcatcctatccaaccctcaggacactctcactgtgtctactactttggagagtctcat
ggctggagggttgggagctgtacccaggagctgcctttcatgtgtcagaagaaaggagag
gtgaatgagtcttctacgacaggatgccctcctgaaggggactggaggagacatgggaac
tcgtgctacaaagtggactctaaagaagtgtcgttcagggacaggtgtgacctcaccata
aacaacaggtttgagcaggccttcatcaatagactccttgcagaagagatcaacgtaaag
agacagtgtttctggacgggcctccaggacataaagacttcaggggagtaccagtgggtc
gctcaggatggctcggaaaccaacgtcacatacaccaactggggcgtgtttgaaccagcc
ctagcagggggctgtgcagtgatgtccacagccaatcctctgggtaaatgggtggtaaag
aactgcactatgtttaaagctggatccatctgtaagagagacatcgccgctccacagccc
ctagagcctgagcctgaccctaacctcccctgtcccgatggatggacatccaggcctggc
atttcctactgctacaaggtgttccatgaggagaggctgagtcgtaagcggtcctgggag
gaggcagagaggttctgtgaggccctgggggcccatctgcccagcttcaaccacccacag
gagatgaaagccctgcactatgttatgagagactccatcagtgatgaccggttcttctgg
gtggggctgaacaggagaaacccagctgctggttcctgggagtggagcgacaacaggcct
gtgtccatggccattttcccccaagagttccacgaggatgacgagtacaaccggggctgc
acagcctttaagacactgaaaggaaccttaaagagtttttttctcttcctgatgcacgaa
ttccctcctctgccgttctacgccaccccattccactgtgacgtcaggctggagtgggtc
tgccagatcccccgtggaaaaactcccgagaacccagagtggtacaatcctggtgggcac
catgagacatccatattcattgacggtaacgagttctggtttgtgatggaaccaaagctg
ccatacgaggaggctagtttgtactgcaacagcaacggcagcaagctggcagcaccacaa
agctccaacgcagccatacagatccataataatctgccacagatgtcggcagggaagcag
agctggtgggtggatgtaagagacgctggacactacttccccataaggttaccccttatg
caaaactaccaggctacgttcctgggcaggtgtacaaccatcagtgacaagaacatcttc
cctgagtacgagtacagctgtgagctgcagctgccattcgtgtgtgagagacacaacacc
acggctatagagacccaccctggagagcctcaccccaatggtctgccctgtgagagcggc
tatttacacttcagggacaagtgctacgtggtgatcacgcctctgtacgttacttttcaa
cacgccaacgagcactgtcagtcgatgagaggaactctactcactatcacagaccaagtt
gaacaggactttgtgacctccctgttgccggcgcagccccgtaagacgtggattggcctg
aagctcaaacagcaggacccagagtgggtggatgactccccggtctcctacctcaacttt
aaccccctgcttcacggcctacgcaggcccatcctcgtcgactttcatgacccagagacc
atggcgctgtgttttttcatgttcaacgaccccagctctgctatgatgggctcctgggac
tacaccccctgctctaaccagcagcatgtggccatctgccagcactacgcagacaagcca
gaggagccccagttccagttggagccgttccaggtcaacaatcacacctttaagctgctt
cagaagaacatgacgtggcacgaggctctggcggagtgcaggaaccagaacatggacctg
gccagcgtagccgacaccctgcagcagtcagtcctcaccgtgcacgtcacccgcgcacgc
agccccatgtggatcggcctcttcagcgcagacgatggtgtccactaccgctggacagac
cacagtcacacggtgtttagtcgctggtcctcagagcccaccgttggacactgtgtcttc
ctggacacggacggcttctggaaggctacggagtgtatggaacagttggcaggggctatc
tgccatgttccacacgaagagaatgtcaccacccatgaggacaacgctgtgaactgtcct
cacaagagcagcggaccaaactggatccccttcaagaacaactgctacaccttccaactg
gcatcgtccagatgggaagagtttgacaagggccagatacttcagacatgcaagaaactg
gctcctgatgcagacatcctgaccatcaggaacgtagtggagaatgagtttgtgaaggag
cagctccttcccttcaaagacctggtgcagtttgtctggctaggggtgttcaaggatgac
aacgataaccagatgaagtggtatgacggtaccaacgtccagtactctaactgggtcgat
ggaagaccaagcttctcagccagcgatgagttcatggcaggtctcaacactgacggagtc
tggaagatattcactaaaaaacaccacttcagccccttcaagcagagaagcatcgtggcc
tgcaaactggataaagactctaaggaccaatacaatcagttggccagggactttgagcgc
tatggcaacctgagctaccacgtgataaccaggaagttgagctggttccaggccctggag
gagtgtggccgcggcaacggacacctggccagcgtgcatggcaccaggcacaacgctcac
atagagcttatcgccaagcgagacggcttcccgctgtggatcggtctgtccagtcaggat
gctagtggctctcagtcttatgagtggtccgatgggactaagtatcactacagtcaggcg
ggactctctgacactgttgtcacgtccagctcagaccctcagagtgtctgtgtgtacatc
actccccatggcacctggatgagaatggactgcaatgccaagctggacggagccatctgc
tacaacacaaccatcaccacccccactcagagatcgaacctcgcagctccccaggtggcc
aacaactgccctcagaacagtggctctcagaacagtggctctaagtgggttgagcaccag
gaccactgctatgcttttgacatgaccttctataactactcagtgtacagcatggaggat
gccaagagcatctgtgaaaggcttgatgcacagctgctgaccataatgaccagagaggag
aatgactttgtctctggctacatggcagacaaccctctcatcaccagtagggtgtggctc
ggcatggacctggacaaacaaggtcagccagtgggctgggtggacggttcctctctggcc
ttctctaactgggagaccaacggttctgctagtggggtgaagacagcgacccagcagaac
ccctgtgctgtcatggtgtctgcagacggaggcatctggagcagagtcagctgcaaggac
agccacagccgcatcgtctgcaaagtacccgcacggtcagggagcgccccggtggtgctg
gtcttcttcctggtcgtcctcacctctctcctggcggccatctgcttcgtcgtttataag
aagagcagggccagattcaactccaccgtgcgctacaggagaaccattgatgatgctgac
agcactagtattatggatgcagagtga
DBGET
integrated database retrieval system
