Oncorhynchus nerka (sockeye salmon): 115129733
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Entry
115129733 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115129733
04082 Neuroactive ligand signaling
115129733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115129733
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115129733
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
115129733
NCBI-ProteinID:
XP_029516259
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Position
LG5:32642881..32693934
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AA seq
539 aa
AA seq
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MEPDETHRGMNMYLWWILLQGFWSVYGELPFIADNNAAMLVNWNAVDGNKKLFAIYDTSV
NEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYF
QQYWRDKRLAYLGIPLNLTLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT
VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVTRIEL
PQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN
YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVN
YIFFGRGPQMQKKLAEKAERANNERAAKYDTNRSPQEGGKTSSLKLTKQPNRAKTLRVSQ
SAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVMGFDNTSTGTGVQCRKASRASGPR
HSLDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatgagactcatagaggaatgaacatgtacctttggtggattttactgcaa
ggattctggagcgtttatggggaacttccattcattgcagacaataacgcagccatgttg
gtcaactggaatgcagtcgatggaaacaagaagttgtttgcaatctatgataccagcgtg
aatgaaccagggaacatgtcgtttgtgaaagagacggtggacaaactactaaagggatat
gatattcgtcttcgaccagactttggaggggcccctgttgcagttggcatgagtatagat
gtggcgagcatagacatggtatccgaagtcaacatggactacactttaaccatgtacttc
cagcagtactggagggacaagaggctggcgtacttagggatcccactgaacctcaccctg
gataaccgggtggcagattcactctgggtccctgacacctacttcctgaatgacaagaag
tccttcgtccacggtgtgacggtcaagaaccgcatgatccgcctccacccggatggaaca
gtgctctacggcctgaggatcacaacgacggcagcctgtatgatggacctgaggaggtac
cctctggacgagcagaactgcactctggagatcgagagctatggatacacgacagatgac
attgagttctactggaagggaggagacaatgcggtgacgggggtgacacgcattgagctg
ccacagttctccatagtggactacaagctggtgtccagaaacgttgtcttttccacaggt
gcctacccacgactgtctttgagcttcaagctaaagaggaacattggctactttatcctg
cagacctacatgccctccatcctgatcaccatcttgtcctgggtctccttctggatcaat
tacgatgcctcggctgcaagagtggcattagggatcaccactgtgctcaccatgaccacc
atcaacacccatctgagagagacgctccccaagatcccctacgtcaaggccattgacatg
tacctgatgggctgcttcgtcatggtcttcctggccctgctggagtatgccttcgtcaac
tatatcttcttcggccgtgggccacagatgcagaagaagctggcagaaaaagccgagagg
gccaacaacgagagggcggccaaatatgacaccaatcggtctcctcaggaaggaggtaaa
acgtcatctcttaagctgactaagcagcctaatagagcaaaaacgctccgtgtctcacag
tcggcggagtcccacggtaatatcctgctgaccaccctggagatccacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcatgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagccgggcctcgggtcctcgc
catagcctcgacaggcacgcccagctcaagaggcacaaactgcggcggcgctcgtcgcaa
ctcaaaatcaaaatccctgacctgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctccgttttctccctctttaatctaatctactggatgtattatgtcaactga
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