Oncorhynchus nerka (sockeye salmon): 115129734
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Entry
115129734 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115129734
04082 Neuroactive ligand signaling
115129734
04519 Cadherin signaling
115129734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115129734
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115129734
SSDB
Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115129734
NCBI-ProteinID:
XP_029516264
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All DBs
Position
LG5:complement(32638311..32667035)
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AA seq
471 aa
AA seq
DB search
MMALSTDIEDKMTSFSTMKHVWISVLLLCITCHVGRGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacatagaggacaaaatgaccagcttttctacaatgaaacac
gtgtggatctctgtcttgctattgtgtattacatgtcacgtgggtcgtggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacgcggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggag
tacaccatcgatgtttttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacacg
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccacgcccaacaagctactg
agactgaaggatgacgggacgctgctctacaccatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagc
tatgcctatccagtctctgaggtggtgtacctctggcaaaccggtgctgccaagtctgta
gtggtggcagaagacggatcccgtctcaaccagtaccacctgatcggccagaccgcaggc
tctgaggacatctacaccagtcgaggacagtacacagtcatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccgtgcttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtctttggt
gtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctcc
gcgcttatcgagtttgccaccgtcaactatttcactaagaggagctgggcgtgggatggc
aaaaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcatctgaaacagaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttc
cccgtcctatttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtcaatatattggctccaacatag
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