Oncorhynchus nerka (sockeye salmon): 115129737
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Entry
115129737 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115129737
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
115129737
NCBI-ProteinID:
XP_029516267
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Position
LG5:complement(33131322..33136052)
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AA seq
699 aa
AA seq
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MLLWIVLLKAALCVAIGNVTRDICKEQICSCNEIEGDLHIDCEKRSFTNLHHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGVLEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGRVI
CEAPTPLQGNDLNETSEMDLCPSIKSGADESLVAPPTQEETSVPGPVPTPYKASGDPGSP
TPGNGKKGRSKSHWQLKTKPTSMTGVNGEREQLQIVQNASCPVPCSCKLIGSRQGLGVNC
EGKKIENLANLKPKPITAHELNMRDNNIHAIKKNHLNGYSSLNLLDLGGNNIKLIDNSTF
QNLTELRWLYMDKNYLDTLIAEMFIGLQNLEYLSLEYNDIQLILAGTFSPLPNLRVLFLN
NNLLKALPVDTFLGVSLSKISLHNNYFTYLPVAGVLDQLNSIIQIDLHGNPWDCSCNIVP
FKQWTEKLGADVIVSDLKCESPEEFWKRDFRHVRNDLMCPKLYDKIYPTSLSKNSTFTAD
TGTRSNSYVEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSSASEI
NSLQTVCDSSYWHSGPYHADGGAQRGFDCSAHFSPTNDA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgtcttgctgaaggcggctctttgtgttgctattggaaatgttaca
agggacatttgtaaggagcagatctgctcctgcaatgagattgaaggcgatttgcacatt
gactgcgaaaaaagaagctttactaatttgcaccatttgactggtcccagttcccagttt
tatcacttgctattgcatgggaattctttatccaggcttttccccaatgagtttgctaac
ttttacaatgccgtaagcttgcatttggaaaacaacggtttgcatgacattgtccctggt
gcttttctgggactgcagctcgtgaaaaggctacacataaataataacaagatacggtca
tttaggaagagcacctttcttggtttagatgacttggaatatcttcaggctgattttaat
ctattgagagacattgacccggccgtgttcagggacttaaataaacttgaagtgttaatt
ctaaatgataacctcatcagtgcactacctataaatgtgtttcaacacgttcccatcacc
catctcgacctgcgagggaaccgaatcaaaacggtgccttatgagggagttctcgaacaa
ataccgggcattgcggaggttttattggaggataacccctgggactgcaactgtgacctg
gtttccctgaaggaatggctggagaatataccgcagaacgcgcttatcggccgggtgatc
tgcgaggctccaacgccactacaagggaacgacttgaacgagacatcggagatggatctg
tgtccttcaataaaaagtggtgctgacgagagtttagttgcacctcctacccaagaggag
acctctgtacctgggcccgttccaacgccttataaagctagtggtgatcctgggtcccca
actccagggaatgggaaaaagggacgctctaaatcgcactggcagttgaaaacgaagccc
acatctatgacaggtgtgaatggggagagagagcagctgcagattgtgcagaacgcatca
tgccctgtgccatgcagctgcaagctcattggatcccggcaggggttaggggttaactgc
gagggcaagaagatagagaacttggctaacctaaaacccaaacccatcactgcgcacgaa
ttaaacatgagagataacaacatccatgctataaaaaagaaccatctcaatggctattca
agtctgaatctccttgatttgggtggaaacaacatcaaattgatagacaacagcactttt
caaaacctcaccgaattaagatggttgtacatggataagaattacctggatacgctcatt
gcggaaatgttcattggacttcaaaatctggaatatctaagtttggaatataatgatata
cagctgatactggcaggcacattcagccctctgcctaatctgcgtgtgcttttcctcaac
aataacttgctgaaagcgctacctgtggatactttccttggagtgtctttatcaaagatt
agcttgcataataattatttcacatatctccctgtcgcaggggtcttagatcaactcaat
tcgatcatacaaattgatttgcatgggaacccttgggattgctcgtgtaatattgtccct
ttcaaacagtggacggagaaactgggggcagatgtgatcgttagtgatctcaagtgtgag
tccccagaagagttctggaaaagggatttccgtcacgtccgaaatgatctgatgtgtccc
aagctgtatgacaaaatctaccccacctctctctccaaaaacagcactttcaccgcagac
acgggtacgcgctcgaactcctatgtggagccgaacagggtatccatctctgtactagtc
cctgggctactactggtatttgtcacgtctgcgttcactgttgtagggatgcttgtcttc
atcttgcggaatcgcaagagatcaaagcggagggatggtaattcctctgcgtcagagata
aattccttgcagacagtgtgcgactcgtcttattggcatagcgggccttaccatgcagac
gggggcgcgcaaagagggtttgactgtagcgcccatttctctccaacaaatgatgcgtaa
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