Oncorhynchus nerka (sockeye salmon): 115129738
Help
Entry
115129738 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115129738
04517 IgSF CAM signaling
115129738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRR_9
LapA_dom
TMEM154
Motif
Other DBs
NCBI-GeneID:
115129738
NCBI-ProteinID:
XP_029516268
LinkDB
All DBs
Position
LG5:complement(33327406..33337503)
Genome browser
AA seq
874 aa
AA seq
DB search
MPRIPTSPHGSTSLSQASFGLATVFLTLHKGYNGQKMLPCIIFLCSFFTAACFQDIQPSK
AFLAESCDSLCSCEEKDGILYLNCEERNISKISQIKVPSALPFHLNLYKNDLVELQAEDL
EDLKNAVSLHLGANSIQELEPGVFSALGSLKKLHINSNFLVMLKEDTFHGLVNLEFLQAD
TNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIFRFVPLTHLDLRGNQLQTLPYVGFL
EHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQSAIGEVVCSSPHHLRGTILAKIKRD
VLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLEAAKDDAKVPTPAYVPASPCVEHCSC
HNHPVAGFLMHCQDRGIQRISDIGILEQTPTKLVLTGNMIQRLLKYDFVTYDGLEILNLA
NNRIDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGLHNLEYLYLEYNIIKEIVPGAF
NPLSNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRKNLLMHLPVSNVLDQLDSLEQIYLE
DNPWDCSCDLVSLKQWVEKLRKDTVIGSILCHTPRKVAMAELRALRNELLCPGLVTYSLP
TGEDESVTTTVATDGTRSGFISSITDSVPLSVLILSLLVIFLVVIFCSAGIVVFLVHRRR
RRVKKKQAEEQPRESSSPIHLQYSMYGQKTTHHTLAQRTGSTIYDERSHSPIVQICRNPT
YCTQHKEYETDLNELDEPKHICRSIMETENTSPLTGSNLKFRAVTSDCPTEFVTLGDASS
LYKNILERERVRELQQLGITEYLRKNMSQLQPTVEVPVPGSGHHEELKLMETIMLSRPRK
VMVEQTKNEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatccctacgtctccacatggatcaacctctctatcccaagcatcctttgga
ttagccacagtctttctcactctgcacaaaggatacaacggacagaaaatgctaccctgc
atcattttcctttgctcatttttcactgctgcgtgtttccaagacatccagccctccaag
gcatttctggctgaatcctgtgactcattgtgttcttgtgaagaaaaagatggcatcctg
tatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaagtgccatcagct
ctacctttccacctcaatctgtacaaaaatgacttggtggagttgcaggcagaagacttg
gaagatttaaagaatgccgtttcacttcatctcggggctaatagcatacaagagcttgaa
cctggcgtctttagtgcactgggctccttgaagaagctccacatcaacagtaatttcctg
gtcatgttgaaggaagacacttttcacggcttggtaaatttggagtttctccaggcggac
acaaacttcatccgcgtggtcgagccgggggcattcagcaaactcatccgcctcaaagtt
ctgatcctcaacgacaacgccatcgagtttcttcccagcaatattttccggtttgttccg
ctcacccacttggacctgcgggggaaccagttacagaccctgccttacgttggcttcctg
gagcacattgggcggatcatggagcttcttctggaggacaacgactggatgtgcgattgt
gagatccttcacctgaagatctggatggagaacatgcgggcccagtcggccattggggag
gtggtctgcagcagccctcatcacctcaggggcaccatcctggccaaaatcaaacgggat
gttctctgcccttctcacgccgatatcaacttagaggagccttccaagtcactggacatg
gtggtcactccgtcttccaaagtggcagagattccgaagttggaggccgccaaggatgac
gcaaaggttccgacacctgcttatgttccagcgagtccttgtgtggagcactgttcttgt
cacaatcacccggtggctgggtttttaatgcattgtcaggacagaggaattcaacggatt
tcagatattggaatacttgagcaaacccccaccaagctggtgcttacaggaaatatgatt
cagagactgttgaaatatgactttgtcacatatgacggtttggagatattgaatttagcc
aacaatcgaatcgattacattgacaatgaaacttttctcagcttaagcaatttgaaaaaa
ctttatctcaacggcaacagaattgaaaccctttccgcgaccatgttcattggactccac
aaccttgaatacctatatttggaatataacattatcaaagaaattgtcccaggagctttt
aatcctttgtctaatctcaaactcttgtctttgaataacaatctgctgactagtctccca
ttgcagatatttcgcaatgtgcccctcaccaaactgaacctgagaaaaaatctgctcatg
cacctgcctgttagcaacgtgctggaccagcttgactctttagagcagatttatttagag
gacaacccctgggactgcagctgtgacttagtcagtctcaaacagtgggttgagaagctg
aggaaggacacggtcataggttcaattttgtgtcacacaccgagaaaagtggcgatggct
gagctgagagccctcagaaatgagttgctgtgccccggcctagtgacctactccttgccc
acgggcgaggacgagagcgtgacaaccacagtggcgactgacggcactaggagcggtttc
atcagctccatcacagactcagttccactctccgttctgatccttagcttgctcgtcatc
ttcctcgtggtcatcttctgttcggcggggatcgtggttttcctcgtgcacagacggcga
aggagggtgaagaagaaacaggcggaggagcagccgcgggagagcagcagccccatccac
ctgcaatacagcatgtacggccagaaaaccacccaccacacactggcgcagaggaccgga
agcaccatatacgatgagcgctcacacagccccatcgtccagatctgccgcaaccccacc
tactgcactcagcataaagaatatgagaccgacctcaatgaactggacgaaccaaagcac
atctgtcgtagcatcatggagacagagaatacctcccctctcacaggctctaatttgaag
ttcagagctgtgacgtcagactgcccaactgagttcgtaacactcggcgatgcgagctcc
ctctataaaaacatactagagagggagagggttagggagctgcagcagctcggaattact
gaatacctcaggaaaaacatgtcccagctgcaaccaacggtagaagtgccggtcccagga
tcaggacaccacgaggaactgaaattaatggagactattatgttgtcgagaccgcggaag
gtcatggtggaacaaactaaaaacgagtactttgaactcaaagctaacctacacaccgag
ccagattatttggaggttctggagcatcaaactgcatttaactga
DBGET
integrated database retrieval system