Oncorhynchus nerka (sockeye salmon): 115129781
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Entry
115129781 CDS
T07952
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115129781
Pattern recognition receptors [BR:
one04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115129781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_9
TIR_2
LRR_5
LRR_NXF1-5
DHU1_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115129781
NCBI-ProteinID:
XP_029516352
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All DBs
Position
LG5:complement(35450802..35454728)
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AA seq
969 aa
AA seq
DB search
MTLKITMPGEQSGPTFSQLRLFLCFLMYCWVLADPVCGYFLKNCTIRGNLSDPSNMKVLC
EKRNLEVIPKDIPRKVSVLDVAMNNISKIGKLDFKGLSNLKILNMSRNQISQLDNGSLRH
LEALQELGLAHNRLTTLSDYLFQGLANLSLLHLDNNLITTIASSSFQLLSSLKTVNLTKN
NLYNMKEVQPIVQLPHLQELYIGSNKFTSFQSQEISNTSIELRLLDLSRNPLGVFRITTD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLRNVKRLNLSGIEMSLERMSMVLQTVNSSLVH
LRLYDISEERVKALTDIACHIPTLSLLRLHHNNISVLSKEFLQSCKQLTEMDVCDNNINR
LSELLFRSMEQLSTLKLGHNRLSSMPKATRNLPTLKILDLSFNIIHELGCPDFANLTGLT
QLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILTLNDAFMSGLHKLEYLSMSYNKLSSI
SKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLQSNKITQIDIRNTVLTGLPS
LRTLDISCNYITYVNDDKLDPPPFSHLTSLENLQIHSQRHKGLCHLPINFLEGLKYLLAF
KAGNLNIKDLHPKTFIHTPRLWYLDISKNEFTALTPKLFHPTPRLNRMYLSKARLQSLDF
LIGANLSRVTFLQVSKNDITVVNETVLQSLPALTYLDMQDNPFTCGCSDAWFVQWMESDN
QTQVVGAGEFTCNYPADLKDTKLLDVELQFCIVHLGLYYYISTTCLVLLTLIASFAYHFL
KWQVIYGYYLFLAFLYDTKQRNKLTPHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWK
LCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISHRYLESEWCSREIQVASFRLFDEQKDV
LILVFLEEIPTHQLSPYHRMRKLVKKRTYLSWPRVGEQTGVFWQQLRLALETKDGSAEEN
PILSGVEAL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggagaacaaagtgggcctacattctctcagctgaga
ctctttctttgtttcctgatgtattgctgggttcttgctgatccagtatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacccctctaacatgaaagtactctgt
gaaaagaggaacctagaagtcataccaaaagacattccacggaaagtaagcgttttagat
gtggccatgaataacatttccaaaattggaaagttggattttaaaggcctatcaaacctc
aaaattctaaacatgtcaagaaaccagatctctcaattggacaatgggtctctcagacac
ctagaggctcttcaggagctgggtctggctcataacagactcacaacgctgtcagactat
ttgtttcagggcctggccaacctctccctgctacatctggacaacaacctcatcacaacc
atcgcgtcctcatcctttcaacttctctccagtttgaagacagtgaatttaaccaagaac
aacctttataatatgaaggaagttcagccaattgtacaattgccacacttacaggagttg
tacattgggagcaacaaattcacctctttccagtcacaggaaatatcaaacacttctata
gagctgagactgttggatttatcccggaatccattgggagtcttcaggatcacgacagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtgctggacaggtcttttctgagaaacgtcaaacgtctgaacctgagcgggata
gagatgtctttggagaggatgagtatggtgctgcagactgtcaactcctcattagtccat
ctgagactgtatgacattagtgaagagagggtcaaggctctcactgatattgcctgccat
atacccacacttagcttgctccgactgcatcataacaacataagtgttctctctaaggaa
ttcctgcagtcatgtaaacagttgaccgaaatggacgtatgtgataataatatcaatcgg
ctgtctgagcttttattcagatcaatggagcaattaagtactttgaaactgggccacaac
aggctttcttccatgccaaaggccacaagaaatctacctacactgaagatcctggatctg
agcttcaatatcatccatgaactgggctgccctgactttgccaatcttacaggactcaca
caactctttcttttccacaatcaaatctccaaccttccaggatgtgtattccaggatttg
aaagacttaaggatccttaaactgggatcaaacaaaatcctgaccttgaatgatgcattc
atgagtggtttgcacaaactagaatatttgtcgatgtcatacaataagctgagctcaatc
tctaaaggagactttaaaggcttagcatcactcaagaccctgcttttatttgacaatcag
attgctagtcttgaagatggagcctttgagggattggtgaatcttacagaacttagactc
cagtcaaataagatcactcaaatagacataagaaatactgtgctcacgggacttccaagc
ttaagaactcttgatatatcctgtaattacatcacatacgtaaatgatgataaattagac
cctccacccttctctcatctgacatctctggagaacctgcagatccatagtcagcgtcac
aagggactgtgtcatctacctatcaacttccttgaaggtctgaaatatttattggcattc
aaggcagggaatctcaatattaaggacctgcacccaaagacatttattcacacaccacgg
ttgtggtaccttgatatcagtaagaatgagttcacagccctcactccaaagctgtttcac
ccaaccccaaggctcaacagaatgtacctgtccaaagcacgacttcagtccttagatttc
ctcataggagcaaacctcagtagagtcacattcttgcaggtgagcaagaacgacataaca
gtagtcaatgagacagtgttgcaatctctccctgccttgacatacctggacatgcaagat
aatcctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagcgacaac
caaacacaagttgttggtgcaggagaatttacctgcaactatcctgccgatctaaaggac
accaagctgttggatgttgagcttcagttctgtatagtacacttaggactttactactac
atttctaccacttgtctggtcctcctcaccctgatagcatcctttgcctaccacttcctg
aaatggcaggtcatttacggctattacctcttcctggctttcctctatgacaccaagcaa
aggaataagctcacgcctcatggctgtcagtacgatgccttcatctcctacaacgcccac
gatgagccctgggtcctgagggagcttctgccagagctggagggagagcagggctggaag
ctgtgtctccaccaccgggacttccagccaggcaaacccatcatagacaacattatggac
ggcatctacggaagccgcaagaccatctgtgtcatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaaggacgtc
ctgattctggtgttcctggaggagatccctacccaccagctgtcaccctaccaccggatg
aggaagctagtgaagaaacgcacgtacctgagctggcccagagttggggagcaaaccggg
gtcttctggcagcaactacggctggctttagagaccaaggacggctctgctgaggaaaat
cccatcctctctggggtggaggctctgtga
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