Oncorhynchus nerka (sockeye salmon): 115129789
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Entry
115129789 CDS
T07952
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115129789
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115129789
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115129789
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115129789
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115129789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
GRP
RRM_occluded
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
115129789
NCBI-ProteinID:
XP_029516366
EnsemblRapid:
ENSONEG00000037715
LinkDB
All DBs
Position
LG5:complement(35711280..35719151)
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AA seq
307 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRGSGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKER
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSSSSGGGGGGGGGGSGGGPS
SSSSRRSSKDYDRGGDRGYDRGYDRGYDRYDDRECYRSYRRRSPSPYYSRGTYRSRSRSR
SYSPRHY
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggattcgcggtccgcttccaggagtgtg
agcccaaggggttctgggaagtctgccagccgctccccggcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccactcccgatcccgctccaagtccagg
tctcgttcccacagaagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgttcccgaagcggggaataccgccgccgtcggagccacagccac
tcccccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccgaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagacctgagagacgtgttc
tctaagtacggccccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggagaga
gctaatggaatggagttggatggacggaggatcagggtcgatttctcaatcaccaaacga
ccacacactcctacccctgggatatatatgggacggcccacatatggtggcggcggcggc
agcagcagcagcggaggcggtggtggtggaggaggaggaggaagtggcggcggccccagc
tcaagctcatctcgccgtagctcgaaggattatgaccgcggcggtgaccgtggttacgac
agaggctatgaccgtggctacgatcgttatgacgaccgagagtgctacaggtcctacaga
cgcaggtctccgtccccgtactacagccgagggacctaccggtctcgctcccgctcgcgg
tcttactccccacgccactactga
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