Oncorhynchus nerka (sockeye salmon): 115129812
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Entry
115129812 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115129812
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
115129812
NCBI-ProteinID:
XP_029516406
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Position
LG5:complement(36271146..36292611)
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AA seq
985 aa
AA seq
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MLWLSLLSVVVLGCVTPTQTHTHTHTPTPTSTHTPMVDSSEEEVDEPCFEPCTCEVKEGV
LHVHCDGRGFTNASQVSQSWLRPFKLNLQRNSLRRLYSNGFLHHSNAVAINLGNNALQDI
RAGAFHGLGTLRRLYLHENKLEVFRNDTFSGLEALEYLQADYNVIKRIDSGALRYLLKLR
VLILNDNLIPALPPHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWIC
GCEAVQLQTWLGHIPYTAVVGDITCEYPFHLHGKDLREIPRKELCAGEVEGEGEKEGERE
KHGGVQPPQHPSSNPKANPKPGRPRPTKPSSMVHHQNTHTSSSSTSSSSVERRGRERSPR
PTKRPRPSRTPPTQRSLLPNQPLPIAGYQTRPPIPIICPLGCTCNLHISDLGLTVNCKES
GFHNVSQLTPRPLNGRKLYLSGNLIQRIYKSASGIFSSLDLLHLGNNRISFIQEGAFSSL
PTLRSLYLNGNNLQRLSPHMFLGLLNLRYLYFEYNEIGVVEVGAFSPMPSLQLLFLNANL
LRSLPIGVFQGISLSRLNLRNNHFLSLPVEGVLEDLTGLVQVDLQQNPWECRCDAAPLKR
WLEGLSAVVVVGEVVCHSPEETTGTDLRSLSLDLLCPDLDTHQATVENQGEWNSSTAPDG
DFSLGYPVPGHGPLGPLPKTSIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRR
QGEVDLAGIQMECGIFTEQQHHRLPVPKTPPPLSALQHSLVYDSILPADPGPNPNLSPST
HMCSSPVYKNEDDSVVKQQWQQQKQFSTSKENGNVGRYHSAGQRESEGHYRFVAEREREC
NMEVSRSPISTVAGAVGPPLSDLHGNGTLCPTVIDSQGPTPKVGLVDCLFGISGMSATVP
EFRDLPDRYTRPPPPRYPHPPQPPQPPEPKEETRASQSLVVTTMTACAGPSNSNQSQNSE
FPRELRMRLSTKPDYMEVLDRSYQF
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctctccctgctgtctgtggtggtcctgggttgtgtgaccccgacccagaca
cacactcacacacacaccccgacacccacctccacacacacccctatggtggacagctcg
gaggaggaggtggacgaaccgtgcttcgagccgtgcacgtgcgaggtcaaagagggcgtg
ttgcacgtgcactgtgatgggcggggcttcactaacgccagccaggtgtcccagtcctgg
ctccgccccttcaagctcaacctgcagaggaactccttgaggcgtctctatagcaacggc
ttcctgcaccatagcaatgccgtggcgataaacctaggcaacaacgcgctgcaggacatc
cgtgccggggcgtttcatggtctggggacactgagacgcctctacctccacgagaacaag
ctggaggtgttccgcaacgacaccttctctggtctggaggcactggagtacctgcaggcc
gactacaatgtcatcaaacgcatcgacagcggggcactacgctacctgcttaaattacga
gtgctcatcctcaacgacaacctgatccctgctctgcctcctcatctcttcagatctgtg
tctctgacccacctggacctgcgggggaaccgtctgaagagcctggcctacgccgggacc
ctggagtacgtgggccgtagcctgatggagctccagctggaggagaacccctggatctgt
ggctgtgaggcagtccagctgcagacctggctgggacacatcccctacaccgcagtggtg
ggggacatcacctgcgaataccccttccacctgcacgggaaagacctgagggagatacca
cgcaaagaactgtgtgccggagaggtggagggagagggggagaaggagggagagagggag
aagcacggaggggtacagcctcctcagcatccgtcctctaacccgaaagcgaaccccaag
cctgggaggcccagaccaaccaaaccgtcctccatggttcaccatcagaacacacatacc
tcatcttcgtcgacttcttcatcatcggtggagcggaggggtagagagaggtcccctcgg
cccaccaagcgtccccggccctccaggacaccccccacccagcgtagcctcctccccaac
cagccccttcccatcgcagggtaccagactcgcccccccatccccatcatatgtcctctg
gggtgcacctgtaaccttcacatctcagacctagggttgacagtcaactgtaaggagagc
ggcttccataatgtgtcccagctcacgccacgccccctcaacggacggaagctgtacctc
agcggcaacctcatccagcggatctataagtcagcttctggaattttttccagtctggat
ctacttcacctgggaaacaacaggatctcctttattcaggagggagcgttctccagcctg
ccgaccctgaggagtctctacctgaatggcaacaacctgcagaggcttagcccacacatg
ttcctgggtctacttaacctcaggtacctgtactttgagtacaatgagatcggtgtggtg
gaggtgggagcgttcagccccatgccgtctctccagctgctcttcctcaacgccaacctg
ctgaggtcacttcctatcggagtgttccagggcatctccctctctcgcctcaaccttcgc
aacaaccacttcctcagcctgcctgtagagggggtgttagaggacctcactggactggtg
caggtggacctgcagcagaacccatgggagtgccggtgtgatgcggcccctctgaagcgc
tggctggagggcctgagtgcggtggtggtggtgggggaggtggtctgtcactcaccagaa
gagaccacaggtacagaccttcgctctctttccctggacctcctctgtccagacctggac
acccaccaggccacggtggagaaccagggggagtggaacagctccacagccccagacggt
gatttctctctgggctaccccgtgccaggccatggccccctgggtcccctccctaagact
tccatccctctgtcggtgttggttctcagcctgctggtgctgttcgtgtcggcgttcttt
gcggcagcggcgctgatcgcctatgccctgaggaggcgggacaagctgccgttccggcgg
cagggagaggtggatctggccgggatccagatggaatgtgggatattcaccgagcagcag
caccacaggttaccggtaccgaagacccctcctcctctgtctgccttgcagcatagcctt
gtctacgatagcatcctccccgccgaccctggccctaaccctaacctcagtccctcaaca
cacatgtgcagtagcccagtctataagaatgaggatgattcagtggtgaagcagcaatgg
caacaacagaagcagttctctacttctaaagagaacgggaacgtgggaagataccactcg
gcggggcagagagagagcgaaggacactatcgttttgtggcagagagagagcgagagtgt
aacatggaggtgtcccgttcccccatcagtaccgttgccggggcagtgggaccccctctt
tcagatctccatggaaacgggaccctctgcccaacggtcatagacagccagggccccacc
cccaaggtgggattggttgactgcctgtttgggatctctggaatgtccgccactgtccca
gagttccgagacctgccggacaggtatacacgtcccccaccaccccgctatccccaccct
ccacaaccccctcagccccccgaacccaaagaggaaactagagccagccaatcactcgtg
gttactacaatgacagcgtgcgcggggccaagcaatagtaatcagagccagaactcagag
tttccgcgagagttgagaatgagactcagtaccaagccggattacatggaagtcctggac
agatcttatcagttctaa
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