Oncorhynchus nerka (sockeye salmon): 115129816
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Entry
115129816 CDS
T07952
Name
(RefSeq) excitatory amino acid transporter 5-like
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115129816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115129816
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
115129816
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
115129816
NCBI-ProteinID:
XP_029516412
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Position
LG5:36450112..36464351
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AA seq
551 aa
AA seq
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MECIKHIIKSMVSVTVWAYIKGYCKRNGLLTLSVIAVVSGCVLGFSLRSFNLSTQAKIYF
SFPGELLMRMLKMLILPLITSSLMSGLSAMDTKASGRLGVLTITYYLWTTFIAVIVGIIL
VLVIHPGTGTEKDGHRGGSGPVMTSADALLDLIRNMIPSNLIEATFQQYRTDLVPIVASS
LVESQANYVYVMPDHNNPQLGHPVFLEITPAPDIKYKIIPGHSSGMNVLGIVIFSATMGL
LLGKMGERGAPLVNVCQCVNECVMKIINAAMWYFPFGIVFLVAGKILDMHDPAHLGEKLG
MYFITVLAGLFVHGLILLPLFYFVITRKNPFTYIRGLLQALVIALATSSSSATLPITMKC
LLENCGVDRQIARFVLPVGATINMDGTALYEAVAAIFIAQVNEYELDFGQLVTISITATA
ASIGAAGIPQAGLVTMVIVLTSVGLPPADITLIVAIDWVLDRFRTMINVLGDALAAGIMC
HLCKKDFERRESNANSARRDTVISFGGQSVQSCALSEAPLMDYAHRCDYVYEVEGDCVTE
KSGPTYNLCQV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcataaaacacattataaagagcatggtctctgtgacggtttgggcatacatc
aagggctactgtaaacgcaacgggctgctgacgctctcggtcatcgccgttgtttctggc
tgtgtgctcggattctccctccgcagcttcaacctctccacgcaggctaagatctacttc
tcgttccctggagaactgctgatgaggatgttgaagatgctgatcctgcctctcatcacg
tccagtctgatgtcggggctgtcagccatggacactaaggccagcgggcggctgggggtg
ctaaccatcacttactacctgtggaccaccttcatcgctgtcatcgtcggcatcatcctg
gtgctggtcatccaccctggtacgggcacagagaaggacgggcacagaggagggtcaggg
cccgttatgacttctgctgacgctctgctggacctcatcaggaacatgattccctccaat
ctgatagaggcaacttttcaacagtaccgtacagacctggtgcccatagtggcctccagt
ttggtggagtcccaggccaactacgtctacgtgatgcccgaccacaacaaccctcagctg
ggccacccggtcttcctggagatcaccccagctccagacatcaagtacaagatcatccct
ggccacagctctggcatgaacgtactggggattgtcatcttctctgctactatgggtctg
ctcctggggaagatgggcgagagaggcgctccattggtcaatgtgtgtcagtgtgtcaac
gagtgtgttatgaagatcatcaatgctgccatgtggtatttcccttttggcattgtgttc
ctggtagcagggaagatcctggacatgcatgaccccgcccacctgggagagaagctgggg
atgtacttcatcacagtgttagccggcctgtttgtccacggactcatcctgctgccgctc
ttctactttgtaatcacacgcaaaaaccccttcacctacatcagaggcctgctacaggct
ctggtcatcgccctggcaacctcctccagttctgccaccctgcccatcaccatgaagtgt
ctgttggagaactgtggagtggacagacagatcgccaggtttgtccttccagtgggagcc
accatcaacatggacgggacagccctctacgaggccgtggcagccatttttatcgctcag
gtcaacgagtacgaactggactttggtcagctggtcaccatcagtatcacagcgacagcg
gccagtatcggggctgctgggattccgcaggcgggcctggttaccatggtgattgtcttg
acctctgtggggcttcctcccgctgacatcacactgatcgtggccatcgactgggtcctg
gatcgtttcaggaccatgatcaatgtgttgggagacgctctggctgcaggcatcatgtgt
cacctctgtaagaaggactttgagaggagggagtcaaacgctaactctgcccggagggac
acagtgatctccttcggtggccagagtgtccagagttgtgccctgtccgaggctcctctc
atggactatgcccatcgctgtgactatgtctacgaggtggaaggcgactgtgtcacagag
aaatctggccccacctacaacctgtgtcaggtttag
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