Oncorhynchus nerka (sockeye salmon): 115129841
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Entry
115129841 CDS
T07952
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115129841
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115129841
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115129841
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115129841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
HEAT
XMAP215_CLASP_TOG
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
HEAT_DAAF5
Sec7-like_HUS
RTP1_C1
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
115129841
NCBI-ProteinID:
XP_029516456
LinkDB
All DBs
Position
LG1:complement(35195696..35322797)
Genome browser
AA seq
1644 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYILDKDRSQDLEQDQTGLDRMVDSIATTWVN
CSNFKVALLGIDLLSVLVTRLQDRFRNHVGTVLPSLIDRLGDSKDQVRDQDQILLLKIME
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMGCLVEIYRHVGERVRMDLSKKGLHQSRLNVIFSRFDEVQRAGNMIPSSGSDK
NFDDEDSVDGGRSCSSASSSKAPPSGRRTVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNREMEDNLSKVREVLSDDKNDWEHRVIALKKVRSLLLAGALEYE
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLMGNKFDHCAETLMPTLLNLVPN
SAKVIATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAILTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSVIGGGMTRGKMVSSRVNSNPGGSLQRSRS
DVDVNAAASAKSCLVTVPSASPFSSAATLPPGSYASLDGTPGKINTGRVRTRRTSAGSAV
GASATVTDSRGRSRAKMVSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPSASSTPADKRSKVPRSQGCSRDSSPSRLGLARSRIPRPSMSQGCSRETSRESSR
DTSPARGFKPLASRRTSRSTSALSTADPHGQSDRFGLIHQDRISASVNAMRVLNTGTEVE
AAVADALLLGDSRNNKRKPMRRRYESPGIYSDDDANSDASSACSERSYGSRNGGIPHYLR
QTEDVAEVLNHCASSNWSERKEGLLGLQNLLKNQRILSRVELKRLCEIFSRMFADPHSKR
VFSMFLETLLDFILVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPF
DHQFNILMRFIVDQTQTPNLKVKVAILKYTESLARQMDPTDFVNSSETRLAVSRIITWTT
EPKSSDVRKTLHNWVVEELSGRSSTAALLSQQAGEGQLEERCKQAAQVVLISLFELNTPE
FTMLLGALPKTFQDGATKLLQNHLKNSSNTSSVSSPSNTIGRTPSRHPPSRTSPLTSPTN
CSHGGLSPSRLWGGCWSGDGLPKHPPPPHPPPPHSTPAGPALRVLRRAYSPSMLEYDTEN
MNSDEIYSSLRGVTEAIQSFSYRSQEDLNELRGKRDDAAGREGVAPSPGSDARLGLDVVE
GGRTALDNKTSLLNTPSPRSFSGPRTREFAPYGYGDTITSSYDKSALKEAVFDDDVEQFR
DCRRQDSSGENKMVLSKGFAPGSQDHSDLVADLLKELSNHNERVEERKGALVELLKITRE
DSLAVWDEHFKTILLLLLETLGDKDYTIRAMALRVLKEILRNQPARFKNYAELTIMKTLE
AHKDSHKEVVRAAEESASTLASSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIT
KESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLQLLTGSKMKLL
NLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtactgtctggcccaggtggtgcagaaagacctggggaggaag
gtgcaggtgggacaggagctcatagattacatcctggataaggataggtcccaggatctg
gagcaagaccagacaggtctggacaggatggtggacagcatcgctaccacctgggtcaac
tgttccaacttcaaggtggctttgcttggaatagaccttttatctgtcctagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactgcccagtctgatagatcgtctg
ggggattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caggctgccaccccacagtacgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaacactcaacatgtacggagcc
caaggcttaaccctcagtaaaatagtccctcacatatgcaatctactaggagatcccacc
agtcaggtgagagacggagctatgggctgcctggtggagatctacagacatgtgggggag
agggtgaggatggacctcagcaagaagggcctacaccagtcacggttgaatgtaatcttc
agtagatttgatgaagtccaaagagctgggaacatgatcccgtcctcgggttcagataag
aactttgatgatgaggactctgtggatgggggccggtcctgctcctccgcatcgtcctcc
aaggcgccccccagcgggaggaggactgtagctgcagcttctgtacgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggagcagtagatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagagatg
gaggacaacctctccaaggtccgggaggttctgtctgacgacaaaaacgactgggagcac
cgagtcatcgctctgaagaaggtgcgttctctgctcctggctggagcgctggagtatgag
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcggctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacttgtccacgctaatgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatcgccacgtctggcatggcagccatacgtctcatcctcaggcataca
cactactcacgtctcatcccaatcatcactagtaactgcacgtccaaatcagtggcagtc
agacggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctattctgacggagaccatcaagaaagggatccatgatgccgactca
gaggccaggtccgtggccagaaagtgttattggggtttccatggccactacagcagagaa
gcggagcatcttttccaggccctggagtcgacctatcagaaggctctccagtctcacctg
aaaagttctgacagcgttgtgtccctcccccaatcagaccgctcatcctcctcctctcag
gagagcctcaaccggcccctgtctgtcaagagtgtcataggaggcggcatgacaaggggg
aagatggtgagttccagggtgaactctaaccccggcggttctcttcagcgttcccgtagt
gacgtcgacgtgaacgctgcggccagcgccaaatcctgtctggtcaccgtgccctccgct
tctcccttcagctcagccgctactctgcccccaggctcctacgcctctctagatggcaca
cctggtaaaattaatacgggtcgtgtgcgtacgaggaggacaagcgctggcagtgccgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgagccaaaatggtatcccag
tcccagcgatccagatctgctaaccccactggcggtggtaaggcccggacttcatccaat
cagactggcagtcgctccagttcccctggaaagcttctgggccactcgtctgggtacggg
aggatcagcaggcccccctcagcctccagcacccctgcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagattcctctcccagccgactgggactagcgaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggaaacctctagggaaagcagccga
gacaccagccctgctcggggtttcaagcctcttgcctcccgacgtacttcccgctctacc
agtgccctatccacggctgacccccacggccagtcagatcggtttggtttgattcaccag
gaccgtatctctgcctcagtaaatgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgatgcactgctgttaggagactccagaaataataagaggaagccaatg
aggcggcggtatgagtctccgggtatctattctgacgacgatgctaacagcgacgcatcc
agtgcatgctcagagcgctcatacgggtccaggaacggaggtatccctcactacctgcgt
caaacggaggatgtggcggaggtgctaaaccactgtgccagctccaactggtcagagagg
aaggaggggctgctgggtctgcagaacctactcaagaaccaaagaatactcagccgagtg
gagctgaagagactatgtgagatcttcagcaggatgtttgcagatccacacagcaagaga
gtgtttagtatgtttctggagactctgttggactttatcttggtgcatagagaagacctg
caggactggctgtttgtcctgctcacccagctactgaagaagatgggagctgacctgctg
gggtctgtccaggccaaggtccagaaggctctggacatcaccagggagtcttttccgttt
gatcaccagttcaacatcctgatgaggttcattgttgaccagacacagacacccaacctc
aaggtgaaggtggccattctgaagtacacagaatcactggcaagacagatggatccgaca
gactttgtcaactccagtgaaacccgactggctgtatctcgcatcattacctggaccaca
gagcccaagagctccgacgtcaggaagacccttcataactgggtggtggaggagctatca
ggcaggtccagtactgccgccttactgtcccagcaggccggggaggggcaactggaagag
aggtgtaagcaggcagcccaggttgtgctgatctctctgtttgagctgaacactccagag
ttcaccatgctgctgggagccttgcccaagaccttccaggacggggccaccaagctgctt
cagaaccacctgaagaactccagcaacaccagcagcgtgagttctcccagcaacactatt
gggcggaccccaagccggcaccccccaagccggaccagccctctcacttccccaaccaac
tgctcccatggggggctatctcccagtcggttgtggggtgggtgttggagtggcgatggg
ctacctaagcacccccctccccctcatcctcctccacctcactccacccccgccggcccc
gccctcagggtcctccgcagagcgtactctcccagtatgttggagtatgacacagagaac
atgaactctgatgagatctacagttccctgcgaggggtcacagaggccatccagagcttc
agctaccgcagccaggaggacctcaacgagttgagagggaagagggacgatgctgcggga
cgggaaggtgtggcgccctctccaggctctgatgcccgtctggggctggatgtggtggag
ggtgggcgtacggccctggataacaagacctcccttctcaacaccccgtccccccgctcc
ttctctgggccgcgaaccagggagttcgccccctacggatacggagacaccatcacctca
tcctacgacaagagcgccctgaaggaggccgtgtttgatgacgacgtggagcagtttaga
gactgccgtcggcaggacagcagtggtgaaaacaagatggtgctctctaagggctttgct
ccaggttcccaggaccactcggacctggttgcagacctgctgaaggaactgtcaaatcac
aatgaacgcgtggaggagcgtaaaggggcgttggtggagctcctgaagatcacccgggag
gacagcctggccgtgtgggacgaacacttcaagaccatcctcctactgctcctggagaca
ctgggggataaagactacactatccgggccatggcactgagggtactgaaggagatactg
cggaaccagccggcccgcttcaagaactacgctgaactcaccatcatgaagaccctggag
gcacacaaagactcccacaaggaggtggtaagagcagcggaggagtctgcctccacccta
gccagctccatccacccagagcagtgtatcaaggtgctgtgtcccatcgttcagacggct
gactaccccatcaacctggctgccatcaagatgcagaccaaggtgatcgaacgcatcacc
aaggagtccctgcaccagctgctgcctgacatcataccaggactactgcagggctatgac
aacacagagagtagtgttcgcaaggccagcgtgttctgtctggtggccatctactccgtg
attggagaagagctcaaaccacacctgcagctactcacgggcagcaagatgaagctgctg
aacttgtacatcaagagggctcagacaaccaacagcaacagcagcagttcctcggatgtc
tcttcacacagctag
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