Oncorhynchus nerka (sockeye salmon): 115129842
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Entry
115129842 CDS
T07952
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115129842
03015 mRNA surveillance pathway
115129842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115129842
03036 Chromosome and associated proteins [BR:
one03036
]
115129842
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115129842
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115129842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
115129842
NCBI-ProteinID:
XP_029516453
LinkDB
All DBs
Position
LG5:36920571..36925296
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AA seq
156 aa
AA seq
DB search
MALESRITQEEIRKIPEKPIDREKTCPLLLRVFTTNGGRHHRGDEFARGQVPSSELQIYT
WMDASLKELTSLVKEVYPEARKKGTHFGFAIVYPEPKRNGYRVKDIGNTVSGRKGENDSM
TLQSQRFQIGDYLDIAITPPNRAPPLNPRMGMGRPF
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgaatcaagaatcacacaagaagagattcgaaaaatccccgaaaagcctatc
gaccgagaaaagacttgtcctcttctgctgcgggtatttacgaccaacggtggcaggcat
cacagaggggacgaattcgcacgaggacaagttccttcaagtgagctgcaaatctacaca
tggatggatgcctcgctaaaggagctgaccagcctagtgaaggaggtgtaccctgaagct
cggaagaaaggaacacactttggtttcgccatcgtttatcctgagcccaaaagaaatggc
tacagagtgaaagacatcggcaacactgtgtcaggcaggaagggggaaaatgactccatg
acgctacagtcgcagcgcttccagataggagactacctggacatagccatcacaccaccc
aatagagcccccccacttaacccacgcatgggcatggggaggcccttctga
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integrated database retrieval system
