Oncorhynchus nerka (sockeye salmon): 115129866
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Entry
115129866 CDS
T07952
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115129866
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115129866
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115129866
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115129866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Sec7-like_HUS
Adaptin_N
TOR1L1_N
Cnd1
HEAT_DAAF5
MMS19_C
ParcG
MMS19_N
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
115129866
NCBI-ProteinID:
XP_029516531
LinkDB
All DBs
Position
LG5:complement(31098439..31138848)
Genome browser
AA seq
1468 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARNPSLPFTPLPEAKAASSRGPSTPGSLQRSRSDVD
VNAAATACAKTRMTPVPSSPAPFSAASALPPGSYASLGRVRTRRTSSGSGVGASPSVTDS
RGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGATTPADRRPKVPRSHGCSRDTSP
DRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRSTSALHSAESVGH
SERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPVRRRYESPGIYS
DDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLL
VSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHREDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILRYIE
CLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLG
ALPKTFQDGATKLLHSHLRNSSNTGVASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSRGG
ALSPSMLEYDTENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEPGRGKREDTPGVGTASH
SGADVVEGPGGRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYTDTISAYDKVALRETVY
EDDVEQLRDGRQECGGENKMLHTKNSSPAEQLELAGELLKELSNPSERPEERRGALVELL
KIAREDSLAVWEEHFKTMLLLLLETLSDQDHTIRALALRVLKEILRNQPARFKNYAELTI
MKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLASIKMQTKV
IERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGS
KMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggaacaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacgaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaagaccaagtcagagaccaggaccaagctcttctactaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agtcaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaaaggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccgctatgcaacttttctctaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggggcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcccatcgtgaccggcagctgccagtccaaatctgtggccgtgaga
aggcgcagttttgagttcttggacctcttgctacaggagtggcagaccagctctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaatccctctcttcccttcactcctctccccgaagcgaaagcg
gcttcctccagaggtccctccaccccgggctctctacagcgttcccgtagcgacgtggac
gtgaacgctgccgccaccgcttgtgccaagaccaggatgactcccgtgccctcctcgccg
gcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcttggccgtgtg
cgtaccaggagaacgagttcggggagcggcgtgggggcgagtccctctgtcacagacagt
agggggagaagtcgagccaaaatggtgtcagtgtctcaacctggcagtcggtctggctcc
cctggtcgtctcctgagccacacatacggcaggatccccagggcaactggagcgacaacg
ccagcagacaggaggcctaaagtcccccgcagtcatggctgcagccgagacaccagtcca
gacagatcaggcctggcgaggagtcgtatcccccggcccagcatgagtcagggctgcagc
agggacacctctagggagagcagccgggacaccagccccgctcggggattctctcctctg
gcgtccagacgtgtctcccgctccaccagtgctctccactcggctgagtctgtgggccac
tcagagcgtctaggtctggcccaccaggcccgtatctcagcctctgtcaacgccatgagg
atcctcaacaccgggaccgaggtggaggcagctgtagccgacgccctgttactaggagac
gccaggaacaacaagcggcggccagtcaggcggcggtacgagtccccgggcatctactca
gacgacgacgctaacagcgacgccagcagcgcctgctctgagcgctcgtatggctcgcgg
aacggcggcccgccccactacatgagacagacggaggacgtggccgaggtgctgaaccac
tgtgccagttccaactggtctgagaggaaggaggggctgctgggactacagaacctgctc
gttagccagagaattctcagtcgtgtggagctgaagcggttgtgtgagatcttcactagg
atgtttgctgacccacacagcaagcgagtgttcagcatgtttctggagaccctggtagac
ttcatcaccctgcacagagaggacctgcaggactggctgtttgtcctgctcacccagctg
ctgaagaagatgggagctgacctcctgggttccgtacaggccaaggtccagaaggctctg
gacgtcaccagggactcgttcccgttcgaccagcagtttaacatcctgatgcgtttcatc
gtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgaggtacattgag
tgcctggcccgtcaaatggaccccgcagactttgtcaactccagcgagacacgcctggcc
gtctcccgcatcatcacctggaccacggaaccaaagagctccgacgtccggaaggcggcc
caggtggtcctgatcgccttgtttgagctgaacaccccagagttcaccatgctgctgggg
gccctgcccaagaccttccaggacggagccactaaactgctgcatagccacctgcggaac
tccagcaacaccggagtggcttctcccagtagcaccatgggacggactcctcccccgcct
cgccaccccagcagtcgcagcagccccctcacctctcccaccaactgctcccgtgggggc
gcgctctctcccagcatgttggagtacgacacagagaacctgaacaccgatcagatttat
agctccctgcgaggcgtcactgaggccatccagaacttcagcttccgcagtcaggaggac
ctcatggagccgggcagaggcaagagagaggacacgccgggtgttggaacagcatcacac
tctggtgccgacgtggtggaggggcccgggggtcgcacggccctggacaacaagacctcc
ctactcaacaccccctccccgcgttccttctccgggccccggggccgcgactacaacccc
tacaactacacagacaccatcagcgcctacgacaaggttgccctgagagagacggtgtac
gaggacgacgtggagcagcttcgagatggccgccaagagtgtggtggagaaaacaagatg
ctgcacaccaagaacagttcccctgcggagcagctggaactggcgggtgagctgctgaag
gagctgtctaaccccagtgagaggccagaggagaggaggggagccctggtggagctgctg
aagatagcccgggaggacagcctggcagtgtgggaggaacacttcaaaaccatgctgctc
ctgctgctggagaccctgtcagaccaagatcacaccatccgggccctggcactacgagtg
ctgaaggaaatcttacgtaaccagccagcccgcttcaagaactatgcagagctcaccatc
atgaagactctggaggcacacaaagactcccacaaagaggttgtgcgggcagcagaggag
tcagcctccaccctggctggctccatccacccagagcagtgtatcaaggtgctgtgtccc
atcgtccagacggctgactaccccatcaacctggcttccatcaagatgcagaccaaggtg
atcgaacgcatcaccaaggagtcactccaccagctgctgcctgacatcataccaggacta
ctgcaggggtatgacaacacagagagcagtgtgaggaaggccagtgtgttctgtctggtg
gctgtctactctgtcatcggtgaagagctgaagccctacctggcccagctaacaggaagc
aagatgaagctgctgaacttgtacataaagagagcccagacgtccaccagcaacagcagc
agctcttcagacatctcctcatactaa
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integrated database retrieval system
