Oncorhynchus nerka (sockeye salmon): 115129916
Help
Entry
115129916 CDS
T07952
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129916
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115129916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115129916
NCBI-ProteinID:
XP_029516574
LinkDB
All DBs
Position
LG5:complement(10748436..10750160)
Genome browser
AA seq
297 aa
AA seq
DB search
MYNMMETEIKSPLPQSNSGSAAGNKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQDQLAYPQHHSPQIQQMHRY
EMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSADHPSLQTSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgagatcaagagcccactcccgcagtccaattcgggttca
gcggcgggcaacaagaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgtggacagcggagaaagatggcacaagagaaccctaaaatg
cacaactctgagattagcaagcggctcggtgcagactggaaacttttgaccgacgcggag
aagagacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccg
gattacaaataccgtccccgcaggaagactaagaccctgctcaagaaagacaagtattct
ttgcctggaggacttctggcgccaggtgccaacgctgtcaacaacggcgtctcggtggga
cagcggatggacagttatgctcacatgaatggctggaccaacagtgcgtactccctcatg
caggaccagttggcctaccctcagcatcacagcccacagattcagcagatgcaccggtat
gagatggcagggctccagtaccccatgatgtcctcggcgcagacctacatgaacgcagca
tccacgtacagcatgtcccccgcatacacgcagcaaacctccagtgccatgggcttgggt
tccatggcctccgtgtgcaagaccgagccgagctcaccacctccggcgattacttctcac
tcccagagagcgtgtttgggggacctgagggatatgatcagcatgtacctgcctcccggt
ggcgacagcgcggatcacccgtccctgcagaccagtcggttacacagtgtacatccgcac
tatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatttga
DBGET
integrated database retrieval system
