Oncorhynchus nerka (sockeye salmon): 115129917
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Entry
115129917 CDS
T07952
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129917
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115129917
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
MS_C
DUF7645
Motif
Other DBs
NCBI-GeneID:
115129917
NCBI-ProteinID:
XP_029516575
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Position
LG5:11204009..11207616
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AA seq
271 aa
AA seq
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MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHTQSSGAWG
APYVAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPTDNISV
AQLSPDRERRNSSYQWMNKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggaatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatactcatacacagtcttcgggggcttgggga
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacact
attcctacgcccatgaacaactcctcgccgggacaagtttcctattgctcacctgaatac
aatccaatgcacgcgccagggtcagcagtattgcaaccacctacagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgaacaaaacg
gtacaatcatcatctaccggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gatcaccagagactggagctggagaaggagttccattttaatcgttacatcactatccga
agaaagtccgaacttgcggggaatcttggcctttcagaacgacaggtgaagatctggttt
caaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatggggtctgatggcagt
ggaggatcagtgcacagtgacccgggttcagtgagtcctctgcccgtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaacttgccatct
attaggaacatacagcaagttactgtcactcagtag
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