Oncorhynchus nerka (sockeye salmon): 115130131
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Entry
115130131 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6-like
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115130131
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115130131
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115130131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
FAR1_N
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115130131
NCBI-ProteinID:
XP_029516786
LinkDB
All DBs
Position
LG6:3169467..3177089
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AA seq
718 aa
AA seq
DB search
MVMDPPGGRDERRRQAERLRREEAYYHFINDLSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPELRPQNTEAGEEEGSSGTAEPGAETSNGDSLLEWLNTFRRTGNATR
SGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPSELSPVPPPSTASI
RTSPSTRPSPYTPARPSPYPSPRATLGRRAQTRRTRSTTTTPPLTPAPFTSPLSPPTALR
STTALHLPPFPITPPTLQDQSSPPQLQSPSGASSQEERQEEGVATLDCPRVAPQAGPQGA
SVGHEPHSSRTRSRGRTRRAVAGGGTSSRSSRRRSRSPLQRNPAPNSATLSPNGGSGNGG
SNNIHTAEPSNGTASVSMETGEAVSEPAVVSEPGPEAEEQEGEGHTAGAGGAGGVRRHPT
IMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTY
VSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADSETTGGTPGHQDP
AGPNANTTTQAYHGNESGTGVEGQAGGVEMETEGVAGAEEEGGQERLVGSDGGAGGVPTP
NEGRPTSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDNLATRTYGQASL
EGEAGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILPVHQD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctcccggtgggcgagacgagcggcggcgtcaggcggagcgtcttcga
agggaggaggcgtactatcacttcatcaacgatctgagcgaggaagagtaccgcctcatg
agagacagcaacctgctgggcacacctggtgaagtgacagcggaggagctacggcagcgc
ctggatggggcaaaggagcgtgtgtcatctcagccccgccctgaactacgcccacaaaat
acggaggccggagaagaggaggggagcagcggtactgctgagccgggagcagagacatct
aatggcgactcactgctggagtggctgaacacgttccgacgaaccgggaatgccacacgg
agcggccagagcggcaaccagacgtggcgcgcggtcagccgcaccaacccaaacagtgga
gagttccgcttcagcctggagatcaacatcaaccatgagcagccggaacccggggagcac
agtgacacccccgacccctcagagttgtcccctgtcccccctccatccacagcgtccata
cgcacttccccttccactcgcccatcaccctacacccctgcccggccctccccctatccc
tcacctcgagcaaccctgggcaggagggctcaaacccgccgtacacgcagtactaccacc
acccctcctctgactcctgcacccttcacctcacccctgtccccccctactgctctaagg
agtacaacagccctccacctccccccattccccatcaccccccctacccttcaggatcaa
agcagccctccacagctccagtccccaagtggagcttcctcccaagaggagaggcaggag
gagggggttgctaccctggactgcccccgtgtagcgccccaggctggcccccagggggcg
tctgtggggcatgagccacacagcagcaggactcgatcccgcggccggacccgcagggct
gtggcaggaggtgggacttcctcccggtcatctaggagacgtagccgctcccctcttcag
agaaaccccgcccctaactcagctaccttatcccctaatggtgggagtggaaatggtggc
tctaataatatccacactgccgagcccagcaacggaactgcttctgtctccatggagacc
ggtgaagccgtatcagagccggctgtagtatcagagcctggtccagaggcagaggagcag
gagggagagggacacacggccggggcggggggcgccggaggggtacgccgccatcccacc
atcatgctggacctgcaggtgcgtcgcatccgaccgggagagaaccgggaccgagacagc
atcgccagccgtacccgctcccgggcccgcgctgctgagaataccgtcaccttcgagagt
gacagtggaggcttccggcgcaccatctcccgctcggagcgggccgggatccggacctac
gtcagcaccatccgtatccctctgaggaggatcagtgagacgggcctgggggagcccagc
tccaccgccctgcgctccatcctcagacagatcatgaccggcttcggagagctcagctcc
ctcatggagacggaggctgactctgagaccaccgggggcacgccaggtcaccaggaccct
gctggacccaacgcaaacaccaccacacaggcctaccatggcaacgagagtggaactggg
gtggaaggtcaggcaggaggggtggagatggagaccgagggagtggcaggggccgaggaa
gaaggaggccaggagagattagtcgggagtgatggcggtgccggtggagtccctaccccc
aatgagggtcggccgacgagcagggacacaaacaacctcgtggaaaacggcacactgccc
atcctgcgtctggcccacttctttctgctcaacgatgaggaggacgaggagcaccctcgt
ggcctgaccaaagagcagatcgataatctggccacgcgcacctacggccaggctagcctg
gagggagaggcggggcgcgcctgcagcgtctgcattaatgagtatgcccaggggaataag
ctgcgccgcctgccctgcgcccacgagttccacatccactgcattgaccgctggctctct
gaaaacaacacctgccccatctgcaggcagcccatcctccctgtgcaccaggactga
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