Oncorhynchus nerka (sockeye salmon): 115130137
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Entry
115130137 CDS
T07952
Name
(RefSeq) tripartite motif-containing protein 55-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115130137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115130137
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115130137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
AIP3
CC_BshC
Zn_ribbon_FGT1_2
Golgin_A5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
115130137
NCBI-ProteinID:
XP_029516798
LinkDB
All DBs
Position
LG6:3310919..3318923
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AA seq
350 aa
AA seq
DB search
MDNLEKQLICPICLETFTKPVVILPCQHNLCRKCANDIFQASNPYLPTRGGSVTSGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESTSSAKPAAPERTEEQAMCQEHKEEK
INIYCVTHSVPTCSMCKVFGAHQDCEVAPLKSMYQTQKTELTDGIAMMVGNNDRIQGIIS
QLKETCRTIEENGRRQKSQLCEKFDHLYAILEERKRDLSSKVVAEQEEKLNYIRGLTKKY
KEHLERSCKTVETGIQTLEEPEMAVFLQTVKDLLKRTGEASSTSHLEKVEQGYEAMDHYT
VNFWREGRALRSIDFISDDEGEYEEVDGGKAEAEVGGGSSTAAPLPSPAP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttggagaagcagttgatttgtcccatctgcctggaaacatttaccaaacca
gtggtcattttaccgtgtcaacacaacctgtgtagaaagtgtgccaatgatatctttcag
gcctccaacccatacctcccaaccagaggggggtcagtgacctccggtggccgtttccgg
tgcccgtcctgcaggcacgaggtggtcctggaccgccatggggtctacgggctccagagg
aacctgctggtggagaacatcattgacatgttcaaacaggagtccaccagcagcgccaag
ccagcggccccagagaggacagaggagcaggccatgtgccaagagcacaaggaggagaag
atcaacatctactgtgtgacccacagcgttcccacctgctccatgtgcaaggtgtttgga
gcccaccaggactgtgaggtggcgccgctcaaaagcatgtaccagacacagaagacggag
ttgactgacgggatagcgatgatggtggggaacaacgacaggatccagggcatcatcagt
cagttaaaggagacctgccggaccatagaggagaatggcaggaggcagaagtcccagctg
tgtgagaagtttgaccatctgtacgccatcttggaggagaggaagagggacttaagttct
aaggtggtggccgagcaggaagagaagctcaactacattcgtggtttaaccaagaagtac
aaagagcacctggagcggagctgtaagaccgtagagacaggcatacagaccttggaggaa
ccagagatggctgtcttcttacagactgtaaaggacctccttaaaaggactggggaggcg
tcgagtacctcccacctggagaaggtggagcaaggatatgaggcgatggatcactacacc
gttaacttctggagagagggcagggccctgcgtagcattgacttcatctcagatgacgaa
ggtgagtatgaggaggtagatgggggaaaggcagaggctgaagtaggaggtggatcctca
acagctgccccactcccatcccccgccccttaa
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