Oncorhynchus nerka (sockeye salmon): 115130145
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Entry
115130145 CDS
T07952
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115130145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115130145
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115130145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
115130145
NCBI-ProteinID:
XP_029516808
LinkDB
All DBs
Position
LG6:complement(3498190..3590336)
Genome browser
AA seq
1950 aa
AA seq
DB search
MFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPPDSKSDSSTLPPIKS
KTSFVEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSGPDSAAPGKKLIDRI
IETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNIYLASKNLIN
QTTAKATLTQMLNVIFARMENQALTNHKISWSLASRKRDRQLQEAKQMEREKHRQHSPVT
QQQEQEQDSPQLQQHTYPTAKGLPREANGPTTPSTPTPTSTPSTPSTSIPVPALKGSTAG
AGDPQEGQGATEESQGATEEEQALQGEPGTVYESTNPENGSEFSTAENHQTEADQPTGLG
AAQHDQEAVEEGEEPNYEEKPQEIVQSILQEVVNTVVGGQCLKPAHMCSDAMESAGETEL
PTEVTEPAKVINEVITKATAITEMVEDEGDSENVHANGIPGTPISASFPPSLPDDRLSVS
SNDTQESGATTGPVPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLS
LQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFK
THLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQGVVDIYVNYDCDLNAA
NIFERLVNDLSKIAQGRAGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNS
QTSLGQEKPSEQETNETKAPETINQYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLK
QQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDND
RFNKEVMYAYVDQMDFQGKDFVYALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQT
EFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDE
IAGKKIAMKGTKEMTLKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTS
ATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVAFLCLEGIRFAIRIACIFTIQLERDA
YIQALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQ
LIGTGVKARYISGTVRGKEGFISSTKEQSNDEYLGLAGGTVDRKQILSIQESIGETSSQS
VVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRI
RLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPF
EHIMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQT
TGHISMNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQA
FKDYTSDDMNVVPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFE
KHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFETLSDVLLDD
ILSQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHALL
TWRLAGAEGDPMTPQDVSDKQLDSISQKSVDIQSRSEDQHSINSAERIAMETRRQSQYSA
GMCEDSPRTRTPTKIQEQRLFSGLLIKCVVQLELIQTIDNMVFFPATSRKEDAENLAAAQ
RDALDAADVRVETQDQGMYRYLTSEQLFKLLDCLLESHRFAKAFNSSNEQRTTLWKAGFK
GKSKPNLLKQETSSLACGLRILFRMYTDDSRQTAWEEVQRQLLNVCSEAVAYFLTLTSES
HREAWTNLLLLFLTKVLKISDDRFKAHASRYYPLLCEIMQVDLIPELRAVLRKFYLRIGI
VFQIAQLPGPPAEPELEVEVERAEVAGEEA
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaccagagctttggagaagatcctggccgacaaagaggttaaaaaggctcac
cattcgcaattgcgaaaagcctgcgaggtggcactcgaggaaataaaggaagagtctgaa
aaattaagtcctcctccagacagcaaatcagattctagcactcttccgccaatcaaatca
aagaccagcttcgtcgaggccgacaagtacttcctgccgtttgagttggcatgtcagtcc
aaatgtccccgcatcgtcatcacatcactagactgtttacagaagctgatagcgtacggc
cacctgacaggcagcggtccagacagcgcggccccgggcaagaagctcatcgacaggatc
atcgagaccatctgcggctgcttccagggaccacagacagatgagggggtgcagctacag
atcattaaggccctgttgacggcggtgacctcccagcacatagagattcacgagggcacg
gtgctgcaggcggtcaggacctgctacaacatctacctagccagcaagaacctcatcaac
cagaccacagccaaggccacactcactcagatgctcaacgtcatcttcgcccgcatggag
aaccaggcacttacaaatcacaagatatcttggtctctggcttccagaaaacgtgaccgc
cagctccaggaggccaagcagatggagagggagaagcaccggcagcactccccagtcacc
cagcaacaggaacaggaacaagactcgccccagctccagcagcacacctatcccacagcc
aagggcctccctcgggaggccaacggccccaccaccccctctacacccacgcccacctcc
accccctccactccctccacatctatacctgtcccggcccttaagggcagcacagctggg
gcaggggacccccaagagggccagggggccacggaggagagccagggggccacagaggag
gagcaggcattgcagggggaaccggggacagtttatgagagcacgaacccagagaatggc
tctgagttcagcacagcagagaaccaccagacagaggcagaccagcccacagggttgggt
gccgctcagcatgatcaggaagcagtagaggagggagaggagcctaactatgaggagaaa
ccccaggagatcgtccagagcatcctacaagaggtcgtcaatactgttgttggagggcag
tgcctgaaacctgctcatatgtgttcagatgccatggagtccgctggtgagaccgagctg
cccacagaggtcacggaacctgctaaagtcatcaatgaggtcatcaccaaggcaacagcg
atcacagagatggtagaagacgagggggacagcgagaacgtccacgccaatggaatcccc
ggcacgcccatctctgccagcttccctccgtcgctgcccgatgacaggctgtctgtctcc
tctaatgatacacaggagtcgggagcgaccacaggcccagtaccaggtgctaagttctcc
cacattctccagaaggatgccttcctagtgtttagatcgctctgcaagctgtccatgaag
cctctgtcagatggtcccccagacccaaagtcccatgagctgcgctccaaggtgctgtcc
ctccagctgctcctgtccatactgcagaatgctgggcccatcttcaagaccaacgagatg
ttcatcaacgccatcaagcagtacctgtgtgtggcactgtctaagaatggtgtctcctct
gtccctgaagtctttgagctctcgctctccatcttcctcactctcctctcccacttcaag
acccacctcaagatgcagatcgaggtgttcttcaaggagattttcctgtatattctggag
acgtcaacaagctcctacgaccataaatggatggttatacagaccctaaccagaatatgt
gcagatgcccagggtgtggtggatatctatgtgaattatgattgtgacttgaatgctgct
aatatctttgagaggctggtgaatgacctgtcgaagattgcacagggccgggcaggccac
gagctcggcacaacaccactccaggaattgaccctgaggaagaaaggcctggagtgtctg
gtgtccatcttgaagtgtatggtggagtggagtaaggaccagtatgtcaaccccaactcc
cagaccagccttggtcaggagaagccctcggagcaagagaccaatgagacgaaggccccg
gagaccatcaaccaatacggaagcatcaactcgctggactccacagcctcgtctggcatc
gggagctacagtacacagatgtcagggacagacaaccccgagcagtttgaggttctcaaa
caacagaaggagatcatcgagcagggcattgacctgttcaacaagaaaccaaagaggggc
atccagtacctccaggagcaaggtatgctgggaaccaccccggaggacctcgctcagttc
ctgcaccaggaggagaggctggactcgactcaggtgggtgagttcctgggggacaatgat
cgcttcaataaagaggtcatgtatgcctatgtggaccagatggacttccagggcaaagac
tttgtctacgctctcagaacattcctcgagggcttccgtctcccgggagaggctcagaag
atcgacaggctcatggagaaatttgctgctagatatctagaatgcaatcaggggcaaaca
gagtttgcaagtgcagacactgcgtacgtccttgcctactcaatcattatgttgacaaca
gaccttcatagtccgcaggttaagaacaagatgactaaagaacaatacatcaagatgaac
agagggatcaacgacagcaaggatctaccggaggaatatctgtcggccatctacgacgag
atcgcagggaagaagatcgctatgaaggggaccaaggaaatgactctgaaatccaacaag
cacagtgtggccagtgagaagcagcggcggctactgtataacgtagagatggagcagatg
gctaagacagccaaggccctgatggaggctgtcagtcacgtccaggctcccttcaccagc
gccacacacctggagcatgtcagacccatgttcaagctggcctggaccccgttcctagca
gccttcagtgtgggcctccaggactgtgacgacactgaggtggcttttctctgtctggag
ggaatacgctttgccatccggatagcctgcatcttcaccatacagcttgagagggatgcg
tacatccaggccctggcacggttcaccctgctcacagccagctctggcatcactgagatg
aagcagaagaatatcgacaccatcaagactctcatcaccgtcgcccacacagacggaaac
tacctgggcaactcctggcacgagataatgaagtgtatcagtcagttggagctggcccag
ctgatcgggacgggggtgaaggccaggtacatctcagggacggttcgggggaaagagggc
ttcatcagcagcaccaaggagcagagcaacgatgaatacctgggcctggcaggtggaaca
gtagaccggaagcagatcctcagtatccaggagtccataggagagaccagctcccagagt
gtggtggtggctgtagacagaatattcacaggttctaccagactggatggtaatgcaatt
gtggattttgtgcgctggctgtgtgctgtgtctatggatgagctggcctcgcccacacac
ccccgcatgttcagcctgcagaagatagtggagatctcctactacaacatgggacgtatc
agactgcagtggtccaggatctgggaggtcattggagaccacttcaacaaggttggatgt
aaccccaacgaggacgtggctatctttgccgtggattctctccggcagctgtccatgaag
ttcctggagaagggagagctggcgaacttcagattccagaaggactttctgaggcctttc
gagcacatcatgaaaaagaacagatcgccaacgatcagggacatggtggtgcgctgtatc
gcccagatggtcaactcacaggcggggaacatccggtcgggctggaagaacatcttctca
gtgttccacctggctgcctcggaccaggatgagagcatcgtagagctagccttccagacg
acgggccacatcagcatgaatgtatttgagaagcacttcccagccaccatagactcgttc
caggatgcagtcaagtgtctgtctgagttcgcctgcaatgcctccttccccgacaccagc
atggaggccatccgtctcatccgccactgcgccaaatacgtctctgacaggccccaggca
ttcaaagactacaccagcgatgacatgaatgtagtcccagaggaccgggtgtgggtgagg
gggtggttccccatcctctttgagctgtcctgcatcatcaacaggtgcaaactggacgtc
aggaccaggggtctgacggtgatgtttgaggtgatgaagacctatggacacacctttgag
aagcactggtggcaggatctgttcaggatcgtcttcaggatctttgacaacatgaagctg
cctgagcagcaaactgagaaagcagaatggatgacgacaacctgtaaccacgcactttac
gccatctctgacgtgttcacgcagtactttgagactctcagtgacgttctgctggatgac
atcctgtcccaactgtactggtgtgttcagcaagataatgagcagttggctcggtcaggc
accaactgtctggagaacgtggtcatcctgaatggagagaagtttactccggagacctgg
gacaagacctgtaactgcatgctggacatcttcaagaccaccatcccacacgcactgttg
acatggagactagcaggagcagagggagatcccatgacaccacaggatgtatcagacaaa
cagctggattcaatttcccagaagtcagtggacatccagtcccgttccgaggaccagcat
tccatcaacagtgcggagaggattgccatggagacccggcggcagagtcagtacagcgca
ggcatgtgtgaggacagccccagaacccggactccaacaaagatccaggagcagaggtta
ttctcaggcttgctcattaagtgtgtagtgcagttggagctgatccagaccatagacaac
atggtcttcttccctgcaaccagcaggaaggaggatgctgagaacctggctgctgcgcag
agagatgctctggacgcggcagacgtccgtgtcgagactcaggaccaaggaatgtaccgc
tacctgacctcagaacagctgtttaagttgctggactgcctgttggagtcccaccgcttc
gccaaggccttcaactctagcaacgagcagaggaccactctatggaaggcaggttttaaa
gggaagtcaaagcccaatctgctgaagcaggagaccagcagtctggcgtgtggcctgagg
atcctgttccggatgtacactgatgacagccgtcagaccgcctgggaggaagtccagaga
caactgcttaatgtgtgcagtgaggcagtagcctacttcctgactctaacatcagagagc
cacagagaagcctggaccaacctgctgctcctcttcctcaccaaggtcctgaagatcagt
gacgacaggttcaaggcccatgcgtccaggtactaccctctgctgtgtgagatcatgcag
gttgatctaatcccagaactgcgggccgtgctacggaagttctacctacgcatcggtatc
gtgttccagatcgcccagctgcctggaccacctgcagaaccagagctggaagttgaggtg
gagagggcggaggtggctggagaggaagcctag
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integrated database retrieval system
