KEGG   Oncorhynchus nerka (sockeye salmon): 115130170
Entry
115130170         CDS       T07952                                 
Name
(RefSeq) actin-related protein 3B-like
  KO
K18584  actin-related protein 3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04144  Endocytosis
one04517  IgSF CAM signaling
one04519  Cadherin signaling
one04530  Tight junction
one04810  Regulation of actin cytoskeleton
one05100  Bacterial invasion of epithelial cells
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115130170
   04519 Cadherin signaling
    115130170
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115130170
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115130170
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115130170
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115130170
   05100 Bacterial invasion of epithelial cells
    115130170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115130170
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115130170
   04147 Exosome [BR:one04147]
    115130170
Membrane trafficking [BR:one04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    115130170
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     115130170
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115130170
  Exosomal proteins of other body fluids (saliva and urine)
   115130170
  Exosomal proteins of bladder cancer cells
   115130170
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA Pcf11_C ALP_N
Other DBs
NCBI-GeneID: 115130170
NCBI-ProteinID: XP_029516875
LinkDB
Position
LG6:complement(4963866..4981325)
AA seq 418 aa
MATPLPPCVIDCGTGYTKIGYAGNTEPQFIMPSCIAIRESAGVGDQAQRRLVKGVDDLDF
FIGDEGIDKPNYATKWPIRHGMVEDWDLMEKFMEQIIFKYLRAEPEDHSFLMTEPPLNTP
ENREYLAEIMFETFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPV
AEGYVIGSCIKHIPIAGRDITLFIQQLLREREVGIPPEQSMETAKAVKERYCYICPDIVK
EFAKYDTDPGKWIKKYKGINAINKSEFHIDVGYERFLGPEIFFHPEFANPDFMQPISDIV
DEVIMNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRSVDARLKLSEELSGGRIKP
KPMEVLVVTHHMQRYAVWFGGSMLASTPEFLQVCHSKKDYDEFGPSICRHNPVFGTMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcaactcctctacctccttgcgtgatagattgtgggacagggtacaccaagattgga
tatgctggaaacacagagccacagtttatcatgccatcctgcatcgctatacgagagtca
gccggtgtaggagaccaggcacagaggcgacttgtgaagggagtggatgacttggatttc
tttataggagatgaaggcattgataagcccaactatgcaaccaagtggcccatcagacat
gggatggtggaagactgggatttgatggaaaagttcatggagcagatcatcttcaagtat
ctgcgggcagagcctgaagaccatagcttccttatgacagagcctccgttgaacacgcca
gagaacagagagtatctggctgagatcatgtttgagacctttaatgtcccaggcctgtac
atcgcagtgcaggcagttctggccctggcagcatcatggacgtctagacaagtaggcgag
cgaacactgacaggaatcgtgattgacagcggagatggagtcacccacgccatacctgtg
gctgaaggctacgtcattgggagctgtataaaacacatccccatagcaggtcgagacatc
accttgtttattcagcagctcctcagagagagggaggtgggcatccccccggaacagtcc
atggagacagccaaggcagtcaaggagaggtactgctacatctgtccagacattgtgaag
gaatttgccaaatatgacacggaccctgggaaatggatcaagaagtacaaaggcatcaat
gccatcaacaaatctgaattccacatagacgttggatatgaacgctttttaggtccagaa
atattctttcatccagagtttgccaacccagacttcatgcagccaatctcagatatagtt
gacgaggttataatgaactgtccaatagatgtcagaagacctctatataagaatattgtc
ctgtctggcggttccaccatgttcagagactttggccggcggctgcagagagacctgaag
cggtcggtagacgcccggctcaaattgagtgaggagctcagtggaggaaggataaagccc
aagcccatggaggtcctggtggttacacaccacatgcagcgctatgccgtgtggtttgga
ggatccatgcttgcctctacgcctgagtttctccaggtttgtcactcaaaaaaggactac
gatgagtttggtcccagcatctgccgccataaccctgtctttggtaccatgtcctaa

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