Oncorhynchus nerka (sockeye salmon): 115130267
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Entry
115130267 CDS
T07952
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115130267
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
115130267
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
TIP49
RuvB_N
Mg_chelatase
IstB_IS21
AAA_28
DUF815
AAA_14
AAA_33
PhoH
nSTAND3
AAA_18
AAA_25
AAA_17
Motif
Other DBs
NCBI-GeneID:
115130267
NCBI-ProteinID:
XP_029517070
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All DBs
Position
LG6:complement(11015144..11035543)
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AA seq
726 aa
AA seq
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MFSFSTTFQPQVTSQLIGQLINALHSLKNSASSKATASVQGLQKDVTPEQDPLLTEPAVN
LRDLGLSDLRVGQLDELLNRLLPSLGSEDGPATSRWRTSHVSAESFFHNKHGLSNTKLGV
FGLPMFHRPNQSPLQVVCSELQYWPVRVQNRGFKTLRKSRRVQSGYVGPAEPEGYTTTFM
KGLLLRPDKAPEAESLDQVVKLKNLPGDQQDAFKSGFTEGFMKSQAFTQRTQDSLRRTRL
ILLVLLLVGIYGLSRTPFLSGKGSFSDAVRFRTTSGLDSQVDPVQVKSVTFEHVKGAEEA
KNELQDVVEFLRNPQKFTVLGGKLPKGILLIGPPGTGKTLLARAVAGEADVPFFYASGSE
FDEMFVGVGASRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEM
DGFKPNEGVIVIGATNFAEALDNALIRPGRFDMQVTVPRPDVKGRTEILNWYLQKIKVDP
NVNAEIIARGTVGFTGAELENLVNQAALKAAVDGLDLVTMKELEFSKDKILMGPERKSVE
IDKKNKQITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPENDQWSETRAQL
LAQMDVSMGGRVAEELIFGDDYITTGASSDFDGATKIAKMMVTRFGMSDKLGVMTYADLT
KQSPETQAAIEKEVRVLLKDSYERAKNLLKTYSDEHKTLAEALLTYETLDAKEIKLVLEG
KSLDPR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttctcgacgacgttccagccacaggtaacaagtcaactcattggccaactc
atcaatgcccttcattccctgaagaattcagccagctccaaggcaacagcttctgtccag
ggtctgcaaaaagatgtcacaccagagcaggacccgctgctcacagagcccgctgtgaac
ctgcgggacctgggtctatcagacctgagggtgggacagttggatgagctgctgaacagg
ttactgccctcactgggctcggaggacggcccagcaacctcaagatggaggacgtcccat
gtctccgcagagtctttcttccacaacaaacatgggttgtcaaacacaaagttgggtgtt
tttggattgcctatgttccacagaccaaaccagagtcctctacaagtcgtctgttcagag
ctccagtactggcctgtaagggtccagaaccgaggcttcaagactctgaggaagagcaga
cgtgtgcagtctggttacgtggggccggcggaaccagaggggtacaccacaaccttcatg
aagggcctcctcctgagaccagacaaggccccagaagcagagagtctagaccaagtggta
aagttgaagaacctgccaggtgaccaacaagatgctttcaagtctggcttcacagagggt
ttcatgaagtcccaggccttcactcagaggacacaagactcactaaggaggaccaggctg
attctattggtcctcctcctcgtgggaatctacggcctgtcaagaaccccgtttctctcg
ggtaaaggctccttttctgatgctgtgaggttccgcaccacatcaggcctggactcgcaa
gtggacccagtccaggtgaagagtgtgacgtttgagcacgtcaagggggcggaggaggcc
aagaacgaactgcaggacgtggtcgagttcctcaggaacccccagaagttcactgtgctg
ggaggaaagctgcctaaaggcatcctcctgatcggccccccgggcacagggaagacactc
ctggctcgggctgtagccggggaggccgacgtccccttcttctatgcctcgggatctgaa
tttgatgaaatgtttgttggtgttggagctagccgcatcaggaacctcttcaaagaggca
aaagccaatgcaccttgtgttatcttcattgatgagcttgacagtgtggggggaaagcgg
attgagtcaccaatgcacccctactccagacagaccatcaaccagctactggcagagatg
gatgggttcaaaccaaatgaaggggtcatcgttattggcgctacaaactttgcagaggct
ttggataatgcgctgataagaccggggaggtttgacatgcaggtgaccgtccctcggccc
gacgtaaaaggacgcacggagatcctcaactggtaccttcagaagatcaaagtggatcct
aacgtgaatgcagaaatcattgccagggggacggtggggttcactggggcggagctggag
aaccttgtgaaccaggcggccctgaaagcagcggtggatggcctggacctggtcaccatg
aaggaactggagttctccaaggacaagatcctcatgggtcctgagcgcaagagtgtggaa
atcgataagaagaacaagcaaatcacagcctaccatgagtcaggccacgccattgtggcg
tattatacaaaagatgccatgcccattaacaaggccaccatcatgccccgtggacccact
ctcggacatgtgtccatgctcccagagaatgaccaatggagtgagacacgtgctcagctc
ctggcccagatggacgtcagcatgggcggccgcgtggccgaggaactcatcttcggcgac
gattacatcacaaccggagcatcaagtgactttgacggggcaactaaaatagccaagatg
atggtgaccaggtttggaatgagtgacaagcttggtgtcatgacctatgctgacctgact
aaacagagccctgagactcaggctgccatcgaaaaggaagtgagggtcctgctcaaggac
tcgtatgagcgagccaaaaacctcttgaagacatacagtgacgagcacaagacgctggct
gaggctctgctaacgtacgaaacgctggatgccaaagagatcaagctggtcctggagggc
aagtccctggaccctagatga
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