Oncorhynchus nerka (sockeye salmon): 115130280
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Entry
115130280 CDS
T07952
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115130280
09123 Folding, sorting and degradation
03018 RNA degradation
115130280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115130280
03041 Spliceosome [BR:
one03041
]
115130280
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115130280
mRNA degradation factors
5'-3' decay
Lsm complex
115130280
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115130280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115130280
NCBI-ProteinID:
XP_029517110
LinkDB
All DBs
Position
LG6:11224743..11231129
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AA seq
62 aa
AA seq
DB search
MKNDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLIPGGEGP
EV
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgacaaagaaattgtcggcaccctattgggtttcgatgattttgtcaacatg
gttttggaggacgtgacagaatttgaaatcacaccggagggaagaaggataaccaaactg
gaccagatcctacttaacggcaacaacatcaccatgctcatacctggaggcgaagggcct
gaagtatga
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