KEGG   Oncorhynchus nerka (sockeye salmon): 115130299
Entry
115130299         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115130299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115130299
   03036 Chromosome and associated proteins [BR:one03036]
    115130299
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115130299
 Complex B
    115130299
 Complex C
   U2 SnRNP specific factors
    115130299
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    115130299
SSDB
Motif
Pfam: SF3b1 HEAT_EF3_N HEAT_ECM29 TOR1L1_N DUF2298 DUF5870 UNC45-central
Other DBs
NCBI-GeneID: 115130299
NCBI-ProteinID: XP_029517158
LinkDB
Position
LG1:37860794..37877780
AA seq 914 aa
MAKIAKTHEDIEAQILEIQGMKAALVEEGGDQGVGLDSTGYYDQEIYGGSDSRFAGYVTS
IAANEQEDDDEEDSSTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPAKIAEREDE
YKARRRQMIISPERLDPFADGGKTPDPKLQSRSYMDVMKEQHLTKEEKEIRQQMAEKAKT
GDLKAVNGSAASQAAAAAAAAKRKRRWDQTAEKQDQSGTPSNAGTPKKMSSWDQADQAAE
QTPGHTPGHTPSNSRWDETPGRNKGSETPGATPSSRMWDPTPSHTPAGAATPGRGDTPGH
TTPGHGGATGSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKS
RWDETPASQMGSSTPLMTPGKTPIGTPAMNMATPSPGHLMSMTPEQLQAWRWEREIDERN
RPLTDDELDAMFPEGYKVLPPPAGYVPIRTPARKLSATPTPMGGMTGFHMQQEDRSMKQI
NDQPSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAAL
RQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILV
VIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVA
SALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVD
EQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPL
MDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFK
HFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQPEDGDGDHRRSWG
TWELLTSTTSWRSS
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaaaacacacgaagacatcgaggcccagatcctggagatccagggc
atgaaagctgccctggtggaggagggaggagatcagggtgtgggcctggactctactgga
tactacgaccaggagatctacggtggcagcgatagccgcttcgctggatatgtcacctcc
atcgcggccaatgaacaggaggatgatgatgaggaggactcgtcaacgagtctacttgga
cagaagaaaccgggatatcacgctccggtggctatactcaatgcaataccacagtcagat
gaacagtacgacccattcgccgaacaccggcccgctaagattgcagagcgtgaagacgag
tacaaggccagacgtcgacagatgatcatctctccggagcgtcttgacccctttgcagat
gggggtaaaacgccggaccctaagctgcagtccaggtcgtacatggacgtcatgaaggag
cagcacctgaccaaagaggagaaagagatccgtcagcagatggcagagaaggccaaaaca
ggagacctgaaggctgtcaacggctctgctgcctcccaggctgctgctgctgctgccgcc
gcaaagcgtaaacgccgctgggaccagacggccgagaaacaggaccaatcaggaaccccc
agcaacgccggcacaccgaagaagatgtccagctgggaccaggccgatcaggctgctgag
cagaccccaggacacacccctggtcacaccccctccaacagccgctgggacgagaccccc
ggaaggaacaagggcagtgagaccccaggggccacccccagctcccgaatgtgggacccc
acccctagccacaccccggctggagcagccacgccaggcagaggggacacaccgggacac
accacccctggacacgggggagccacaggcagcgtgcgcaaaaaccgatgggacgaaacc
cccaagactgagagggagacccctggtcatggaagtggttgggccgagaccccccgtaca
gacagaggagacgagtcagtgggagagacccccacccccggggccagtaaaaggaaatcc
cgttgggacgagacccccgccagccagatgggctcttccaccccactgatgacccctggg
aaaactcctatcggaacccctgccatgaatatggccactccttctccaggtcacctgatg
agcatgaccccagagcagctgcaggcctggcgttgggagagggagatagacgagaggaac
cgacctctcacagacgatgagctggatgccatgttcccagaaggatacaaggtccttccc
ccaccagcaggctatgtgcccatccgtaccccggcccggaagctgtctgccacccccacc
cccatggggggcatgacgggcttccatatgcagcaggaggaccgctccatgaagcagatc
aacgaccagcccagtgggaacctgcccttcctcaaaccagatgacattcagtactttgac
aaactgcttgttgaggtggatgagtccactctgagcccagaggaacagaaggaacgtaag
atcatgaaactactgctaaagatcaagaacggaacacctcccatgagaaaggctgccctg
cgtcagatcacagacaaggcgagggagtttggagcagggcccctgttcaaccagatcctg
cccctgctcatgtctcctactctggaggaccaggagcgccacctgctggtcaaggtcata
gaccgcatcctctataagctggatgacctggtccgcccatatgtacacaagatcctggtg
gtgattgagccgctgctgattgatgaagattactacgccagagtggagggcagagagatc
atctctaatttggccaaggctgccggcctggccactatgatctccactatgagacctgat
attgacaacatggatgaatacgtcagaaatacaacagcaagagcttttgctgtcgtagcg
tccgctctgggtatcccctccctcttgcccttcctcaaagctgtgtgtaagagcaagaag
tcttggcaggcccgccacacgggcatcaagattgtccagcagatcgccatcctcatgggc
tgtgccatcctgccccatctgaggagtctggtggagatcatcgagcatggtctggtggat
gagcagcagaaggtgcggaccatcagtgccctggccatcgccgccctggcggaggctgcc
acgccctacggtatcgagtcctttgactccgtactcaaacccctgtggaagggtatccga
cagcacagaggaaagggtctggctgcgttcctgaaggccattggctacctgatccctcta
atggatgctgagtacgctaactactacaccagagaggtcatgctgatcctcatcagagag
ttccagtcccctgacgaggagatgaagaagatcgtgctcaaggtggtgaaacagtgttgt
ggtactgacggtgtggaggccaactacatcaagacagagatcctgcctcccttcttcaag
cacttctggcagcacaggatggccctggacagacgcaactacagacagctggtggacacc
acagtggagctggccaataaggtgggagcagcagagatcatctctcgtatagtagatgac
ctgaaggacgaggcagagcagccggaagatggtgatggagaccatagaagatcatgggga
acctgggagctgctgacatcgaccacaagctggaggagcagctga

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