Oncorhynchus nerka (sockeye salmon): 115130360
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Entry
115130360 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115130360
KO
K19538
retinitis pigmentosa 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115130360
04812 Cytoskeleton proteins [BR:
one04812
]
115130360
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115130360
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
115130360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
115130360
NCBI-ProteinID:
XP_029517290
LinkDB
All DBs
Position
LG6:complement(15695198..15709973)
Genome browser
AA seq
2790 aa
AA seq
DB search
MSEVGPRRPPQDQSSGSGHTVTTSRHPYITDPIASKHVCFYKSGDPQFSGLRMAINSRTF
KTFDALLDSLSKKVPLPFGVRNITTPRGVHAVHTLDELEDGKAYICSDQRKVKPINMAAA
SKKLPPWYHVRPMSARHRALQLAKQNPGRPMRKKKPVTVRTPKRLMVFRNGDPSVKHNMM
LQKRTTPTFEALLDYVSELMHFPVVKLHTPDGRRVDGLPALILCSGIVVAAGREAFKSGN
YKTQRSSAPTWLPARRMASKRLKQPAPRKMKSVSSSKSHLFSSSSERYFVNQIHHSVAGS
QCDLPSNNTGSVVLEAGHFLESVAETDADTYNGHEGADNCMPGDDDIEKSFRVNQDGSMT
VEMKVRLTIKEEETIHWTTTLTRSSVASQLSVAESELEIRSPESNALPPTQPNAMGTING
YNAKKDDHDDEDDMSPEASGLTSVEGDDEDNSKIHVSEVSLRRAPTPGPRRSRQKQASLE
NINTPSGDEIQENIVGSYSYRETTKNGEVKEEYCMVRQCSSRPVPKPRRVGSMDINNYNK
TQSTFKSGAAEILQIQNGEEEVRESVMQIYEQQTCQDNFLANSQYSVQGVSTYGLMYGRP
ATSETARFSSSNDLEMELERLSTASESISVRRADQSLSSDFTIPTFKAGGSVLRNRVLNV
HKTSLSKPTKDNETPKLVSEASKENSTTKAVKKVKKRFSKPKLRKYQVRKSTTPDKRRKE
SNANGPENNKRVKTGGFSRNASIRKIYGPKPARSLMKNKLKGKEIKLNIENPKESSVKEL
NVSENGNETSVSVKKKSLHVSFPTEAQVKATLKRQRSVHEERRIAKECHDLSLPALLLSS
SNINEYVENWLEKALPTVYPDPVEETQHVETPTMSQVETEGDIVPDVSEINCEMDIEEDE
SCFLKEKTHIPSSPSLVTAAFPNRTFENIATQTNLTMENTTLPCPSDPSLQNTPLHIDTI
QERLPTNPSAENPPLSNSFSVFLPAITSVEKPSPSDSPSLEQTSMPIKISVEKLPIPNDL
SLENTSVPNSSLKEKIPVSNCLSPEKTPLPAKTQTEKTPLSNKVSDGSSVASSPSYLMCS
SPSSLGDEEQPLSSSPSSDEAPSTTGHVFEKTLFNHSTLKEPPSPKLATKKTRLLSNLSL
EKQLSFRGGRKASAEKSSISSDPTVEKVLVDKAPISNGLSSDKTSHPAKTLISNNVLNEA
SLASSPSCFISTSPTNRTSDERALSISPLSEEDLSPTGHVLEKTTLFNHSTLRETSSPKL
PTKKTRLISNVSLEKQLSLRRLSVDKSSLSSNPTLEKARLSNPVQITVDKTQLPNSHSLE
ETSPPNKSSLPSDSTSENTQLSSIPQQGRTPLPRLISLKTQLHNNFSPERTNLPTLMTRN
KSAPSNLSSEKIPVPSNRTLKNRLSPYSQTLEIVSPPTRLKAKKKPVSRNHSLEIEPSPV
SPTLKRTPLPRKSRQTPLSPKSTPVHLNPSMKKKPTPPSPALVNHEETNGDDNLSNSDQG
DSTKVTAEEPLTKAQIPSYREQLPPQPDMKPVLEKLCFSIRSIRQITHNNRPSCLEKSNS
LPDFSSHVASTFGSSSKALLAFLSVITLKESFTNWNLPELNANSVSCAEALKMIESLREI
ANIEDAEELKASLSDLQKSTSSQLLQSWKGFQELNDKVRSRSSALNSSEHDLLFETRPVE
DYNIKEKALDIDELINELDVPEKVKEALAALSTGVSMSMDGNEIKNSKKAHEKVESSPEG
RVNANSTAVPKEEAEKDHVLNKEATVDVKSIIKTFTNIHHPKEVAENTVSPIPESPSSRQ
EQYFSSKEHSFKEDYICHRNRQPANKEGAELEQDNWEEEEAKCTYKHVNHDEEQTSSEIE
QAYSLVLHDGYLDKPACSVEAREKDGDIQAGYVEEEESLKKEQEYYIENPPSHVGQEVTS
MELQVSCKESVEKDQASSEEEQKCHVEDQISHVESESKCVEEEWLKEEQQCHIDDQPSYC
GMQVSREERESTPEEQASSEEECECHIGQNHEDPEVKCLDLQDSSENGKSTPKEDQASSD
EEERHVASKPTHEEPEVKCTDVKVSSEENMSSLEEEQASLEEELECHTENQPSHEEKGVK
CTDVKVSSEENMSSFEEDQASLEEELECHTENQPSHEEKGVKCIEMQVSREEREYTPEDD
RASLDEEEENRADNLPNANAHINVKDEQTHLWMKQTTENEIVSTVIEIKPSLVKQHSSDD
RMDKDSGKDSEQHVSFEQQSDTVEEANVEDNRRGTEKKQVHCEEKLPSSEAEHVGVKDEP
YTEDESYAEYEESFVEKQPFEEDTNYETTEAKTTNRFEEPLPSVAERVKLLDKKIADVEQ
RKSITLETTGIKPFAHIKVPAFSDGDDLTSVSHLSNEQAELVEEASEMQTTNYVVKDVKE
QDKAPVHTCKRTTWPINTSETVVMSPPAPQSSSLAFSYDGCITREPEGNRVKKIKEMFMA
KSIVDIQYGQTRLTSPNSSDLSDNRPGTSDGSHRSLTSTEMSSGEDDSVKKSITKGFVRR
TIERLYGKKDTNEKVLASESQPISVPRPKSREFPGKISLSPFHNARTKVMLDLSYFNATS
SFDTYSEPTRCIAFNTQVGPGDCVPIEENRWLLRECVIRKSVSEPINIYKNTSALTEDEC
KDAKEDVPYSLFGHTDREDMVKTVKPFVAKCTYFNLPHGCDSDPYQDDLSSVSKGSAMGD
VSKDSKDNAEEPKLWAEKNGTLPDFSPTDFKMPDNKVHPLIEGPGGGKVVVVQPGKGQSG
KGQTDVKKIPQEPDALEMLYFSCGQHCPIL
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgggtccaagaaggcccccccaggaccagtcctcggggagtgggcacaca
gtgaccacgtcacgtcacccctatatcacagaccccatcgcctccaagcacgtctgcttc
tacaagagcggggaccctcagttcagtggcctgcgcatggccatcaacagccgcaccttt
aagaccttcgatgccctcctggacagcctctccaagaaggtcccgctgccgttcggagtg
aggaacatcaccaccccgcggggtgtccatgcggtgcacacactagatgaactggaggat
gggaaggcctacatctgctcagaccagcggaaggtcaaacccatcaacatggcagcagcc
agtaagaagcttccgccctggtaccatgtcaggcccatgagcgcccgccatcgggccttg
caactggccaaacagaaccctggcaggcccatgcgcaaaaaaaaacctgtgactgtgcgc
acacctaagaggctaatggtgtttcggaatggggacccaagtgtcaagcacaatatgatg
ctacagaagaggaccactcccacctttgaggcgctgctggattacgtgtccgagttgatg
cactttcctgtggtcaaactacacacaccggatggaagaagggtggatgggctccctgct
ctgattctatgctctggtattgtagtagctgccggtcgggaggcctttaagtctggaaac
tacaagacacagagatcttctgctccaacatggcttcctgccagacgaatggcatctaaa
agactaaaacaaccggcaccccggaaaatgaagtccgtgtccagcagcaaatcacatctt
ttctcctcatcgtcagagagatactttgtgaatcagatacaccactccgttgcaggaagt
cagtgtgacctccccagtaacaacacgggatctgtggtgctggaggctggccattttctg
gagtcagttgccgaaacggacgccgacacctacaacggacatgaaggggcagacaactgt
atgcccggtgatgatgacattgagaagtcctttcgggtgaaccaggatggcagcatgacg
gtggagatgaaggtacgactgaccatcaaggaggaggagaccatccactggaccaccacc
ctgaccaggtccagtgtggccagccagctcagtgtggctgagtctgagctggagatcaga
tctcctgagtcaaatgcactaccaccaacacaacccaacgccatgggcaccatcaatggg
tacaatgctaaaaaggatgatcatgatgatgaggatgatatgtctccagaggccagtgga
cttaccagtgtggaaggagatgatgaggataattctaaaatacatgtcagtgaggtctct
ctcaggagggctcctaccccaggacccaggagatccagacagaagcaggcctcattggag
aacatcaacacaccatcaggagatgagattcaggagaacattgtgggatcatactcctac
agagagacaactaagaatggagaggtcaaagaggagtactgcatggtcagacaatgcagc
agcaggccagtccctaaaccaaggagagttggctctatggatatcaacaattacaataag
actcaatccacttttaaatcaggggcggcagagatcttacagatccaaaatggcgaggag
gaagtcagagaaagtgtaatgcagatatacgagcagcagacctgtcaggacaatttcctt
gctaacagccagtacagtgtccagggtgtgtccacgtatggtctgatgtatgggagacca
gccacctcggaaacagcccgcttctcctctagtaatgacttagagatggagctggaaaga
ctctctacagcctcagagtcaatcagcgtgcggagggctgaccagtctctgtcatctgac
ttcaccatacccacttttaaggctggagggtctgtcctaagaaacagggtactaaatgtc
cataaaaccagtctctccaagcccaccaaagacaacgagaccccaaagttggtctctgaa
gcaagcaaagaaaattccaccactaaagctgtaaagaaagtcaagaaaaggttctcaaag
cccaagttgagaaagtaccaggttcgtaagagtacaacaccagacaaaagacgtaaagag
agtaatgcaaatggtcctgaaaacaataaaagagtgaaaactggggggtttagccgcaat
gcatcgataaggaaaatttatggaccaaaacctgccagaagtctaatgaaaaataaacta
aaaggaaaggaaatcaaattaaatattgaaaacccaaaggaatcgtcagtgaaagaacta
aatgttagtgaaaatggaaatgaaacgtcagtttcagtaaagaagaaatcattgcacgtt
tcatttcctacggaggcccaggtgaaggcaacactgaaaaggcagaggtccgtgcacgag
gagagaaggattgcgaaagagtgtcatgatttgtcgctgcctgcactccttttgtcctct
tctaatatcaatgaatatgttgagaactggctagagaaagccctcccaactgtgtaccca
gacccagtggaggaaactcaacatgtggagacaccaactatgtctcaggtagaaactgag
ggggacattgttccagatgtgtcagaaatcaattgtgaaatggacattgaagaagatgag
tcttgttttttgaaagaaaaaacacacataccaagtagtccatctttggtaacagcagca
tttccaaatagaacatttgaaaatatagcaacacagacaaacctgactatggaaaacaca
acattaccatgtccttctgacccatcattgcaaaataccccattacacattgatactata
caggaaaggttgcccactaatccctcagctgaaaatccacctctctccaacagtttctct
gtctttcttcctgcaataacctcggtagaaaagccatcaccctctgacagtccttcgttg
gaacaaacatcaatgcccatcaagatctcagtagagaagctaccaatcccaaatgatctg
tcattggaaaatacatcagtaccaaatagctccttaaaagagaagatcccagtctcaaac
tgtctctcgcctgagaagacaccactgcctgctaaaacacaaacagagaagacaccattg
tccaacaaagtatcagatgggtcttcagtagctagcagtccctcatatttaatgtgttca
tcacctagtagtttaggtgatgaagaacaacccttatcaagcagtccttcatcagacgag
gctccgtcaacgactggccatgtatttgaaaagacattgttcaaccactccactctgaaa
gaaccaccatcgcctaaactcgcaacaaaaaagacacgattgctcagtaatctctccctg
gaaaagcaactatcattcaggggcggcaggaaagcctcagctgaaaagtcttcaatatcc
agtgatcctactgtggaaaaggtgttggtggataaggcaccaatctccaatggtctctca
tctgacaagacatcacatcctgctaaaaccttaatatccaacaatgtcttaaatgaggct
tcattagctagtagtccctcatgtttcatctcgacatcacctactaatcgcacatcagat
gaaagagccttatcaatctcccccctatcagaggaggatctatcacccactggccatgta
ttggaaaaaacaacattgttcaaccactccactctgagagaaacatcatcacctaaactc
ccaacgaagaagacacgattgatcagtaatgtctccctagaaaagcaactatcactcaga
agattgtcagtggataagtcttcattgtccagtaatcctactttggagaaggcccggtta
tcaaaccctgtccaaatcacagtagacaaaacacaactaccgaacagccactcattggaa
gagacatcgccaccaaataagtcttccttacccagtgactccacttcagaaaatacccaa
ttatctagcattcctcaacaaggaaggacaccactaccaagacttatctctttgaaaaca
caattgcacaacaatttttcacctgaaagaacaaatttacccactcttatgacgaggaat
aagtcagctcccagtaatctctcttcagaaaagataccagtacctagtaatcgcacattg
aaaaatagactgtcaccatattctcagactttggaaatagtgtcaccacctacgagactc
aaggcaaaaaaaaagccagtatctagaaatcactctctggaaatcgaaccgtccccagta
agtcccaccttgaaaaggacacctctaccaaggaaaagccgccaaacgccattatcgcct
aagtcaacgccagtacatctcaatccctccatgaagaagaaaccaacacctcccagtccc
gctttggtgaatcacgaagagacaaatggtgatgataacctgagcaattcggatcaggga
gacagtacaaaagtaacagcagaggagcctctaacaaaagcacagataccatcgtacaga
gaacaactacctccccagccagacatgaaacctgtgctagagaagctctgtttctcaatt
cggtcaattagacaaatcacacacaacaatcgtccatcttgtcttgaaaagtcaaacagc
ttacctgatttctcctcccatgtggcctctacatttgggtcatcctccaaagctctcctg
gcattcttatctgttattaccttaaaggaaagcttcactaactggaacctacctgaattg
aatgcaaacagtgtaagctgtgctgaggctttgaaaatgatagagtctctgagagaaatt
gccaacatagaggatgcagaggagttgaaagctagcctgtcagatttgcaaaagtctact
tcctcacaactgctgcaaagttggaagggcttccaggaactcaatgacaaagtcagaagt
cgcagctcagcgctgaacagttcagagcatgatctcttgtttgagacacgcccagtggag
gactacaacattaaagaaaaagcactggatatcgatgagctaataaatgagcttgatgtg
ccagaaaaggtcaaggaagcattggcagccctttcaacaggggtgagcatgagcatggat
gggaatgaaataaaaaattctaaaaaagctcatgaaaaagtggagtcatccccagaggga
agggtaaatgccaattcaaccgcagtccctaaggaagaggctgaaaaagatcatgtgctt
aataaagaggctactgttgatgttaaatccatcattaaaacatttacaaatattcaccat
cccaaagaggtggctgaaaatacagtgtcaccaatcccagagagcccaagcagtaggcaa
gagcagtacttctcctcaaaagaacacagctttaaagaggattatatttgccacagaaac
agacagccagcaaataaggaaggtgctgagcttgagcaggacaactgggaagaagaggag
gctaaatgtacatacaaacatgttaaccatgatgaagaacagacatcctcagagatagag
caagcttacagtttagtattgcatgatggctatttggacaagccagcctgttctgtggag
gctagagagaaggatggggacatacaagcaggctatgtggaggaggaagaaagcttgaag
aaagagcaagaatactacattgagaacccaccaagtcatgtggggcaggaggttacatct
atggagctgcaggtcagctgtaaggaaagcgtagaaaaagaccaggctagctcagaggaa
gaacagaaatgtcatgttgaggaccaaattagccatgtggagtcagaaagtaaatgtgtg
gaggaggaatggttgaaggaagagcaacaatgtcacatagatgatcagccaagctattgt
gggatgcaggttagccgtgaggaaagagagtccacccctgaggagcaggctagctcagag
gaagaatgtgagtgtcacataggccaaaaccatgaggacccagaggtcaaatgcttggac
ctgcaggatagcagtgagaacggaaagtccacccctaaagaagaccaggctagctcagat
gaagaggaacgtcatgttgcgagcaaaccaacccatgaagagcctgaggttaaatgtaca
gatgtaaaggttagcagtgaggaaaacatgtctagtcttgaagaagagcaggctagctta
gaggaagagctcgaatgtcacactgagaaccaaccaagtcacgaggagaaaggggttaaa
tgtacagatgtaaaggttagcagtgaggaaaacatgtctagttttgaagaagatcaggct
agcttagaggaagagctcgaatgtcacactgagaaccaaccaagtcacgaagagaaaggg
gttaaatgtatagagatgcaggttagtagagaggaaagagagtatacccctgaagacgac
cgggctagcttagacgaggaagaggaaaaccgtgcagacaaccttcccaatgcaaatgca
cacattaacgtgaaggatgagcagactcacttatggatgaagcagactactgaaaatgaa
atagtgtctactgtcatagaaattaagcctagcttggtcaaacagcattctagcgatgac
aggatggataaggacagcggaaaggatagtgagcagcatgttagctttgaacaacagtct
gatactgtagaagaagccaacgttgaggataatcggcgtggcacagagaagaagcaagta
cactgtgaagagaagctgcctagctctgaggcagaacatgttggcgtaaaggatgagcca
tatacagaggatgagagttatgcagagtatgaggaaagcttcgtagagaaacagccgttt
gaggaggatacgaattacgaaacgactgaggcaaaaacaaccaaccgttttgaggaacca
ttaccatctgtagcagagcgagtaaaactactggataagaagattgctgatgtagagcaa
aggaaaagcattacattagagacaactggcatcaaaccgtttgcccacataaaggttccc
gctttctcagatggcgatgatttaacaagcgtatcccatctatctaatgaacaagccgag
cttgtggaggaagcatctgagatgcaaacaaccaattatgttgttaaggatgtcaaagag
caagacaaagctcctgtgcacacttgtaaaaggacaacgtggcctataaatacatcagaa
actgtagtcatgtcccccccagctccacaatcctcctcgctagcatttagctatgatggc
tgtataactagagagcctgagggaaatagggtcaagaaaataaaggaaatgtttatggca
aaaagcattgtggacattcagtatggacaaacaagactaaccagcccaaacagctcagat
ctgtctgacaacaggccagggacttctgacggtagtcatcgatcactgacgtcaactgag
atgtccagtggtgaggatgattctgtgaagaaatccatcacgaaaggctttgtcaggaga
actattgaaaggctttatgggaagaaagatacaaatgaaaaagtccttgccagtgaaagt
cagccaatatctgtcccaagaccaaagtccagagaatttcctggtaagatcagcctttcc
ccattccataatgcacggaccaaagtaatgttggacttatcatacttcaatgccacaagc
tcttttgacacatacagtgagccaacgcggtgtatcgccttcaatacacaggtcgggcct
ggagactgtgtcccgatagaagaaaacaggtggctcctcagagagtgcgtgatcagaaag
tctgtctcagagcctattaatatttacaagaacacatctgcgttaacggaagatgagtgc
aaagatgcaaaagaagatgttccatactcccttttcggccacaccgatcgggaggacatg
gtgaagactgtgaaaccttttgtggcaaagtgcacctatttcaacctgcctcatggctgt
gactcagacccgtaccaggatgacctaagttctgtcagcaagggcagtgccatgggtgac
gtctcgaaggacagtaaagacaatgcagaggaacccaagttgtgggctgagaagaatgga
accctgccagatttttcccctactgacttcaagatgccagataataaagtgcaccctctg
atagaaggcccgggaggtggaaaggtcgtggtggtccagcctggcaaaggtcagtctggc
aaaggtcagacagatgtcaagaaaattccacaggagccagatgcactagagatgctctac
ttctcctgtggccagcactgccccatcctttga
DBGET
integrated database retrieval system
