Oncorhynchus nerka (sockeye salmon): 115130365
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Entry
115130365 CDS
T07952
Name
(RefSeq) myomesin-1-like isoform X1
KO
K24495
myomesin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115130365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115130365
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115130365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
V-set
Ig_CD22
C2-set_3
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
115130365
NCBI-ProteinID:
XP_029517296
LinkDB
All DBs
Position
LG6:16005218..16039262
Genome browser
AA seq
1621 aa
AA seq
DB search
MSGSTPFYQKHHRHYDRGYRSKELESAVSQYQSSSSSSYAARRSSSRASASAALSASSGH
VVALHERTTPIPCSYTRLSSSYSGLEESRLSPMPKRAKPTYLAMDKENQIIGYVVPIFRG
SQEYASGFSDTEEARVKESAGYMARRNLFTSGLEMERTEQTSRKVSMRESAERISLSKRI
YENEEHHKRMNKDSLMHAPEFVIKPRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVTID
PMAYPGKYKLESSYNVHSLEINRCDFDDTAQYRVSAMNSKGELSSFASIVVKRFKGEVEE
ALPMPRHGLISEYGITFDTHIVDGFGVSFGREGETMSLGATVIISPNLARYQPEVQWYRD
DVLLQPSKWCHMHWSGDKATLTLTHLNKEDEGLYTLRITTKSKYETYSAYVFVRDADAEV
EGAPGAPLDVKCQDANKDYVIVTWKQPAVDGGSSILGYFVDRCEVGTTHWSQCNDTPIKF
ARFPVTGLVEGRSYTFRVRAVNKSGMSRPSRVSEVVAAMDPADRARMRGTSAPWTGQIIV
TEEEPAEGVVPGKPKELEVTEATKNYVVLSWKPPGERGHEGIMYYVEKCVSGTDSWQRVN
TEIPVKSPRFALFDLAEGKAYNFRVRCCNSAGVGEPSEATEATTVGDKLDIPSAPGRVVP
TRNTDTSVVVSWEASRDAKELVGYYIEASIVGSNKFEPCNNKPVKGTRFICHGLVTGESY
VFRVKALNAAGLSECSQESEAIEVKAAIGGGIPHASPTPPYGISVLECVRDSMVLAWKQP
TFIGGADITGYFVDYREVINGVPGTWHEANVKSVSDRAYRVSDLKENRKYQFQVRAANMA
GVGIPSLPSGTFVCEEWTIAVPGPPHDLQVTEVRANTLVLLYKPPVYQGRDPVNGFYIDI
KEADAEEEAWRGVNEKAVLTNYMKIKILKEGETYVFRVRAQNKAGVGKASEPTEPVLAET
KPGTTEIVVDVDDDGVISMNFACSNLTPDSKFVWSKNYEEITDDTRITVATSGGKSKANF
NMLAEDDIGIYSCAVTHTDGACSSYTLSAEELKKLLELSHDHKFPIIPLKTELAVELQEK
GRIRFWLQAEKISANGKIEYVFNDNSLSQGEKYKMNFNKDTGVIEMIMESLLPEDEGTFT
FQLQDGKATNQSSLVLIGDVFKGLQKESAFMRKEWHRKQGPHFVEYLSYEVTPECCVILK
CKVGNIKKETVALWYKDGREVKGDEKLTFTEGVLKLEIAQISKKDAGVYEIVLKDDRGQD
TSTLNLTEQGFRDLMNEVFSNIANSSTALKIQSTDEGIRLYSFVSYYNEALQVTWHHKDS
AIAFTDRIKSGVVGEQLWLQITEPTEKDKGKYAIEFHDGKGGLKRTVELSGQAFDDAYAE
FQRLKAAAIAERNRARVAGGLPDVVTIQELKALNLTCNISGEPLPEVVWLKNEREIVSDG
HYVMKLEAGKYASFTITTVNTADSGKYSILVKNKYGTESADFTLVVTEGKGDLGVTSYLT
DADGNVIIGCKSRPTTPTERRKSVTGKKMQKRKDSVILQKPPEEKEGKKKEEKKMEDKTD
ALPKTTDKKKAAPAVASRVGKQETLQQPTTTADEAKPDDVPTSEKPAEKPQINKGKNDQD
E
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatccacacctttctaccagaaacatcaccgccactatgaccgtggttaccgc
agcaaggagttggaatcggctgttagccagtaccagtcaagcagcagcagcagctatgct
gcccgtcgcagcagcagcagagccagtgccagtgccgctctcagtgccagcagtggacat
gtcgttgcactgcatgaacgaacgacgcctatcccttgtagctacaccagacttagttcc
tcatactctggcctggaggagagcagactgagcccaatgcccaagagagccaagcccacc
tacctggctatggacaaagagaaccagattatcggctatgtagtgcccatcttcaggggc
agtcaggaatatgccagtgggttttcggatactgaggaggcccgggtgaaggagagtgct
ggatacatggcccggaggaatctgttcaccagtgggttggagatggagcggacggagcag
acgtctaggaaggtgtccatgcgcgaatcagccgagcgcatctccctgagcaagaggatc
tatgagaacgaggagcaccacaagcgtatgaacaaggatagcctgatgcacgccccagag
tttgtgattaagcctcgctcccacacggtgtgggagaagcagtgtgtcaggctgcactgt
actgtctctgggtggcctgacccacgggttgtctggtacaaaaacaatgtgacaatcgac
ccaatggcctacccaggcaagtataagctagagagcagctacaacgtgcactcattggag
atcaacagatgtgatttcgatgatactgcacagtatcgtgtttctgccatgaacagcaag
ggagagctctcctcctttgcctccatcgttgttaagagattcaaaggagaggtagaggag
gctctccccatgcctagacatggcctgatctctgagtatggcatcacctttgatacccac
atcgtggacgggtttggcgtgtcgttcggacgggagggcgagaccatgagcctgggcgcc
acagtcatcatctcccccaacctggcacgctaccagcctgaagttcagtggtacagagat
gatgttcttctgcagccctccaagtggtgtcacatgcactggagtggagacaaagccacg
ctgaccctgacacacctgaacaaggaggacgagggtctctacaccctgcgcatcaccacc
aagtctaaatacgagacctactcggcttacgtctttgtcagagatgccgatgcggaggtg
gagggagcccctggcgcccctctggatgtgaagtgtcaggacgccaataaggattacgtc
atcgtgacctggaagcagccggctgtggacggtggcagctccatcctgggctactttgtg
gacaggtgtgaggttggcaccacccactggagccagtgcaacgacacgcccatcaagttt
gcccgtttccccgtgaccgggttggtggaggggcgctcctacacattccgtgtgcgtgcc
gtcaacaagtctggcatgagccggccatcccgtgtctctgaggtggtggcagccatggat
cctgccgaccgcgcgcgaatgagaggtacctctgcaccctggaccggccagatcattgtc
actgaggaggagcctgcagagggcgtggtccccggcaaacccaaagaactggaggtcacc
gaggccaccaagaactatgtggtcctgagctggaaaccccctggggagagaggccacgag
ggcatcatgtactatgtggagaagtgtgtgtcaggcacagacagctggcagagggtgaac
actgagatcccagtgaagtctcctcgcttcgccctgtttgatctggcggagggaaaggcc
tacaacttccgtgtgcgctgctgcaactccgccggcgttggcgagccatcagaagccacc
gaggccaccactgtcggggacaagctggatatcccgtctgccccaggccgtgtggttccc
accaggaacacagacacgtccgtggttgtgtcctgggaggcttccagggacgctaaggag
ctggtgggatactacatcgaggccagcatcgtgggtagcaacaagtttgagccatgtaac
aacaagcctgtcaaaggcaccaggtttatctgtcacggtctggtgacaggagagagctac
gtgttcagagtgaaggcactgaacgccgctgggctcagcgagtgttctcaggagtctgag
gctattgaggtgaaggctgctattgggggcggtattcctcatgcgtcccctactccaccc
tatggcattagcgttctggagtgcgtgcgggactctatggtgctggcctggaagcagccc
accttcatcggaggcgctgacatcaccggctacttcgtggactaccgtgaggtcatcaat
ggggtgccagggacatggcacgaggccaacgtcaagtctgtcagcgacagagcctacaga
gtgtctgacttgaaggagaacaggaagtaccagttccaggtgcgtgctgccaacatggca
ggcgtgggcatcccttctctgcccagtggaacatttgtctgtgaggagtggaccattgct
gtgccaggacctccccatgatctgcaggtgacagaggtgcgcgccaacactctggtgttg
ctttataagccaccagtgtaccagggccgtgacccagtcaacgggttctacattgacatc
aaagaggctgatgctgaggaggaggcttggagaggagtcaacgagaaggctgtcctcact
aactacatgaagattaagattctaaaggagggggagacctatgtgttccgtgtgcgtgct
cagaataaggcaggtgtgggaaaggcctctgagcccacagaaccagtcctggccgaaacc
aaaccaggcactacggagattgttgtggacgttgatgatgatggagtgatctccatgaac
tttgcctgctccaacctgactccagactccaaatttgtgtggtcaaagaactacgaagag
atcacagacgatactcgtattactgtggcgaccagcggggggaagtccaaagccaacttc
aatatgcttgcggaggatgacatcggcatttactcttgtgctgtcacccacaccgatggt
gcttgctccagctacactctctcagcagaggagttgaagaaactgctggagctcagccac
gaccacaaattccccattattccattaaagacagagctggctgtggagctgcaggaaaag
ggcagaattcgcttctggctgcaggctgagaagatctctgctaatggcaaaatagaatat
gtgtttaacgacaacagtctctcccagggagagaaatacaagatgaacttcaacaaggac
acaggtgtgattgagatgatcatggagtctctgctcccagaggacgagggaaccttcacc
ttccagctgcaggacggaaaagcaaccaaccagtccagcctggtgctgattggagatgtg
ttcaaggggctgcagaaggagtctgcgttcatgcgcaaagaatggcacagaaagcaaggt
cctcactttgtggagtatctgagttatgaagtgaccccagaatgttgtgttatcctgaaa
tgcaaggttgggaacataaagaaagagactgttgcattgtggtacaaggatgggcgcgag
gtcaagggagatgagaaactcaccttcaccgagggagtgctcaaactggagattgctcag
atctcaaagaaggatgccggtgtctatgagattgttctgaaggatgacagagggcaggac
acatccacgttgaatctgacagaacaaggtttcagggacttgatgaatgaagtgttcagt
aatattgccaactcctccactgcactgaagatccagagcacagacgagggcatcagactc
tactcctttgtcagttactacaatgaggcgctccaggtcacctggcaccacaaggattca
gcgatagccttcacagaccgcattaagagtggtgtggtgggagagcagctgtggctacag
atcacagagcccacagagaaagacaagggcaaatacgccatcgagttccatgatggaaag
ggcggtctgaagaggactgtagagctgtctggccaggcatttgatgacgcatatgcagaa
ttccagaggctcaaagcggccgctattgcagagagaaatcgtgctcgcgtggcaggaggc
ctgcctgatgtcgtcaccatacaggagttaaaggccctgaacctgacctgtaacatttcg
ggcgaacccctgcctgaggtcgtctggctgaagaacgagagggagattgtgtctgatggc
cactacgttatgaagctcgaggcgggcaagtacgccagcttcaccatcaccacggtgaac
acggcagactcgggcaagtacagcatcctggtgaagaacaagtacggcacagagagcgcc
gacttcaccttggttgtaacagaaggcaaaggggacttgggagtgacctcctatttgact
gatgctgatgggaacgtgatcattgggtgtaaaagcagacctaccaccccaacagagagg
aggaagtcagtcactgggaagaaaatgcagaagagaaaggattccgtaatcctccagaag
ccaccagaggaaaaggaggggaagaagaaagaagaaaagaagatggaggacaaaactgat
gctttgccaaaaaccacagacaagaaaaaggctgcccctgctgttgcaagcagggtcggc
aagcaggagaccctgcagcagcccacaactacagcagatgaggcgaagccagatgatgtc
cccacatctgagaaaccggcagagaaaccacagattaacaagggcaaaaacgatcaagat
gagtga
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integrated database retrieval system