Oncorhynchus nerka (sockeye salmon): 115130366
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Entry
115130366 CDS
T07952
Name
(RefSeq) EMILIN-2-like
KO
K24246
emilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115130366
Domain-containing proteins not elsewhere classified [BR:
one04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
115130366
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Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Fib_alpha
DUF1202
Motif
Other DBs
NCBI-GeneID:
115130366
NCBI-ProteinID:
XP_029517302
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Position
LG6:complement(16080576..16098854)
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AA seq
1123 aa
AA seq
DB search
MKCLPTGFVLKRALFPLLLTFPLINGTPSRYNMFQGSAYSGSEQRQRNKNWCAYVVHKNV
SYAVVGGTESFVQPESAPCQMHQLNCAQQVMYRTQFRPMYKVGYKLVTELEWRCCPGYQG
HDCKDLKGVPSRQTVLGPQSNPPPAPGHIAETQGPGQQAWGQSGHPWGAEGQPEGQTGQG
GVSGQVASQGGSQTTQQMEEEVQRLSQQVLDMQAAMTSLSANLRVDLQEDASKMLVTLLN
NLRQPESVRGEQQSMLLQDLSLEKEYKMVNMDEFTNKINNLTDTLNTKSNTLDDLHSRVN
HHDGQLRLLMEATQAPLATPLPAPPANDVALRAYVDAKFHALRDEMMEGMEIKMSDLKNS
CDYKILSVQEQSEFQENSYLSLTELLESKEMDLRKEIQDLKNELPGLLRGEGTPPGLQEL
QKELFRVSGAQPRLQSSLEKKPEPDQLLPHVEELEAHLNMSERSVEVHNLFLEEKLRREW
AEGATNLKKAIEDRMSSMEDRVTSLLVEISSPLSRPQAGLEALPGEVTSHKTSVQALEDR
FNALDQLCSTECKSDQLAIKSIQNNLQVYKTSLDTMQSSMKGHSASLGDMEEFVQGQLLN
HTASLTDTQEELWALKGRMGGQEGFLSALGLSLSQQSLELQGQLLNHSASLAGVEEALEA
LSGRIGVQEGSLSDLGVSLSAHLKDVRGELGALSERIGGQEGSLSALGISLSRQSLELQQ
LNTCCQSSVGPAHDARDLLELHLAQREELRARLEELGQKVRSEADHCRNRTEGVALDVTT
VDGRVASLDNMCSRLEPISSSLHRIKEGLNKHVTGLWNCVSEINDTLLAHTKDIEGLKGT
YQNLQDHFSVITQDLHHLTTSPENTGVHGVEESGNPTETKPVPQSPVLPIGPIPDGALPP
HMIETGEAGAPGIMISSKPPKGADGSMTPIKGFAGAPASPPSKGSLKPNIPVISVAHIPL
RPSLHKPYLTVTGERVSFSAGLNLLPFPGEVGIIRFNKVLVNDGGHYDPHTGIFNVPMEG
HYLLTAVLTAQRGARVEAVLSVSNHSIQRLDTAGYLPTNGGGGGASSTSCDCGGSASLSL
VLTLKRGDRAGLVMTAGKLAISENTEVLSTFSAVLLYPTSSKR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccttcccaccggattcgtcttaaaacgtgccttatttcccttattgctcacc
tttccattgatcaatggaacgccgtcacggtataacatgttccagggaagcgcatactct
ggctcagaacaacgacagaggaataaaaactggtgtgcatacgtcgtgcacaagaacgtg
agctatgcggtcgtgggtggcaccgagagctttgtgcagccggagtctgcgccttgccag
atgcatcaactcaactgcgcgcaacaagtgatgtatcgaacccaattccgccccatgtat
aaggttggctataagctggtgacagagctggagtggaggtgctgtccagggtaccagggt
catgactgcaaagacctgaaaggtgtcccgtcccgtcagacagtcctggggcctcagtcc
aacccgcctcctgcccctggacacatcgcagagacacagggtccggggcagcaggcgtgg
ggtcagagtggccacccctggggggcagaggggcagccagaaggtcagacaggccagggg
ggggtgagtggccaggtggcgagccagggagggagtcaaacgacacagcagatggaggag
gaggtgcagcgtctgtcacagcaggtcctggacatgcaggcagccatgaccagcctgtct
gccaacctgagggtggatctgcaggaggacgccagcaagatgctggtcacgctgctcaac
aacttgcggcaaccggaaagcgtgcgtggcgagcagcagagcatgcttctgcaggacctc
tccctggaaaaggagtacaaaatggtgaacatggacgagttcacaaacaagatcaacaac
ctcacagacaccctcaacaccaagagcaacaccctggatgacctccattccagggtcaac
caccatgacggacagctacgtctgctaatggaggccacacaggcccctctggccacaccc
cttccggctcccccggccaatgacgtggccctgcgcgcctacgtggatgcaaagtttcac
gccctaagggacgagatgatggagggtatggagatcaagatgtcggacttgaagaactcg
tgtgactataagattctgtcagtgcaggagcagtctgagttccaggagaacagctacctc
agcctgaccgagctcctcgagtccaaggagatggacctccgcaaggagatccaggacctc
aagaatgagctgcctggtctgcttaggggagagggaaccccaccaggtctgcaggagctg
cagaaggagctgttccgggtctccggggcccagccgagactccagtccagcctagagaag
aagcccgagcctgaccaactcctgccccatgtggaagaactggaggcccatctaaacatg
tcagagaggagcgtggaagtgcacaacctcttcctagaggagaagctgaggagagagtgg
gcagagggggctacgaacctgaagaaggccattgaggacaggatgagctccatggaggac
cgggtcaccagtctactggtggagataagcagccccctatctaggcctcaggctgggctg
gaggcactgccgggtgaggtgacctctcacaagaccagcgttcaggctctggaggacaga
ttcaatgcccttgaccagctgtgctctacagagtgcaagtctgaccaactggccataaag
agcattcaaaataacctccaggtctataaaaccagcctagacaccatgcagtctagcatg
aaaggccactcagctagtcttggagacatggaggagtttgtccaagggcagctcctgaac
cataccgccagtcttacagatacgcaggaagagctatgggctctgaaaggacgtatggga
ggacaggagggcttcctgtcagccctggggctctctcttagccagcagtccctggagctc
caagggcagcttctgaaccacagtgccagtcttgcaggtgtggaagaagcacttgaagct
ctcagtgggcgtattggagtgcaggaaggctctctgtcagacttgggtgtctctctcagt
gctcatcttaaagatgtgcggggagagctgggagctctcagcgagcgtattggaggacaa
gagggctctctatcggccctgggtatatctctcagccggcagtccctggagctccagcaa
ctgaacacctgttgccagagcagcgtggggccggcccatgatgccagggacctgctggag
ctccacctggcccagagagaggagctaagggcccggctggaggaactgggacagaaggtg
aggtccgaggcagaccactgcaggaacaggaccgagggtgtagctctggacgttacaact
gtagatggccgggttgccagcttggataacatgtgcagcaggctggagcccatctccagc
agcctgcacaggatcaaagaggggctgaacaagcacgtgaccggcctgtggaactgtgtc
agcgagatcaacgacaccctgcttgcccacaccaaggacatcgaaggactgaagggaaca
tatcagaacctccaggaccacttctcagtcatcacccaggacctccatcatctaaccacc
agtcctgagaacactggcgttcatggtgtggaggagtctggtaatcccactgagaccaag
cctgtccctcagagccctgtcctgcccattgggccaataccagacggggccctaccacca
catatgatagagactggggaggcaggagcccccggaatcatgatctcttccaaaccgccc
aagggggctgacggcagcatgacccccatcaagggcttcgctggagccccagcttcccca
ccctctaaagggtctttaaagcctaatattccagttatttctgttgcccacattcccctg
agaccgtcattacacaaaccgtatttaactgtaacaggtgagcgggtgtccttctcggct
ggtctcaacctcctgcccttccctggtgaggtgggcatcattcgcttcaacaaggtgttg
gtgaatgatggaggacactacgaccctcacacaggcattttcaatgttcccatggagggc
cattacctgctgactgctgtgctgacagcccagagaggtgccagggtggaggcagtgctc
tctgtgtccaaccacagcatccagaggctggacacggctggttaccttcctactaatggt
ggcggaggtggggctagctccactagctgtgactgcggaggctcagcctccctgagcctg
gttctcactctgaagcgtggggacagggcaggtttagtcatgaccgcaggcaaacttgct
atctctgagaacacagaggtcctctcgacttttagcgccgtgcttctctaccccacctcc
tcaaaaagataa
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