Oncorhynchus nerka (sockeye salmon): 115130386
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Entry
115130386 CDS
T07952
Symbol
cacnb2
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2 isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115130386 (cacnb2)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115130386 (cacnb2)
04261 Adrenergic signaling in cardiomyocytes
115130386 (cacnb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115130386 (cacnb2)
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115130386 (cacnb2)
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
EF1_GNE
Motif
Other DBs
NCBI-GeneID:
115130386
NCBI-ProteinID:
XP_029517341
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Position
LG6:16657280..16772510
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AA seq
742 aa
AA seq
DB search
MVHNNLQKTHSLLDRHMDSLENPGLQSHGKGARRKGRFKGSDGSTSSDTTTNSFVRQGSA
DSYTSRPSDSDVSLEEDKEAVRREAERQAQAQLEKAKTKPVAFAVRTNVNYCATNDDDVP
VPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKIENTRIQHEQRAKQGK
FHSGKSGANSSTSLGEVVPNSRKSTPPSSAFDIDATGLDPEDNELPVHLRSPKASQPNTV
MSSTLAKEKRMPFFKKTEHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRF
EGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRSNLVAEVQSEIERIFELARTLQLV
VLDADTINHPAQLGKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQ
CPAEMFDIILDENQLEDACEHMADYLEAYWKSTHPASCNPPNPLLPKVSTAALPSSPAPV
SSMQGSGAEQKAGDKAGQGVERKGSREDHHHHHHHSQHQSQEQPDGEREEEEEKEEEGRP
LRTESSRRPQHIHHRSSSQRTEQHHNNHHHHHHTGGGGSRGKGLSRGETQDSETPESRES
RESRDSAYIEPRTHLLHQEEEEEEFGEEEYEEEGLGEAGHPQQGRYEAPPHPRDHNHHHH
HHHHRGGTGEEADHGTTGHHRSKERNEQDHNERNKPRGHQHHQRPARDHHQYYDRDRDRE
GEVAPKKRGDTGDWARDPYIHQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggtccataataacttgcaaaagacgcactcacttttggacagacatatggattcgctc
gaaaaccctgggctacaatcacatggaaaaggagcacggaggaaaggcagattcaaagga
tcagatggaagcacctcttcagatacaacaaccaacagctttgtgcgacagggttcggcg
gactcctacaccagccgtccatcagactccgatgtgtccttggaggaggataaggaggcc
gtgcgacgagaggcagagcggcaggctcaggcacagctggagaaggccaagactaaaccg
gttgcgtttgctgtccgcacaaatgtcaactactgtgccaccaacgatgacgacgtcccc
gtgccgggcatggccatctcctttgaggctaaagacttcctccacgtcaaagagaaattt
aataacgactggtggatagggcgcctggtgaaggaaggctgtgaaatcggtttcatcccc
agtcctgtgaagatcgagaacactcggatacaacacgagcagagagccaaacagggcaag
ttccattccggtaaatcgggagcaaactcctctaccagtttaggtgaagtggttcctaac
tcgcggaaatccacccccccttcctctgcctttgacatagatgccacaggcttagacccc
gaggacaatgagcttccagtccacctccgctcccctaaagccagtcagccaaacactgtc
atgtcatccaccctagccaaagagaaacgaatgcccttctttaagaagacggaacacatt
cctccatacgacgttgtgccttccatgcgacctgtggtcctggttggaccgtcactgaag
ggctatgaggtgacagatatgatgcaaaaggcactgtttgactttttgaaacaccgattt
gaagggagaatatcaatcactcgtgtcacggcagacatctctcttgccaaacgctcggtc
ctcaacaaccctagtaagcacgccatcatcgagcgctccaacacacgctccaaccttgta
gctgaagtgcaaagtgagatagagcgtatctttgagctggcccggaccttgcagctggtg
gttctggacgcagacaccatcaaccacccggcccaattgggaaagacctccctggcccct
atcatcgtctacgtcaagatctcctctcctaaggttctgcagaggctcatcaagtccaga
gggaagtcccaggccaagcacctcaatgtccagatggtcgctgcagacaaactggcccag
tgccctgccgagatgtttgacatcatcctggatgaaaaccaactggaggatgcgtgtgag
cacatggctgattacctggaagcctactggaagagcacccaccccgccagctgcaacccc
cccaatccgctgctgcccaaggtgtccacagccgccctgccctccagccccgctcctgtc
tccagcatgcagggcagcggggcagagcagaaagcaggggacaaggcaggacaaggtgtg
gagaggaagggctccagggaggaccaccaccatcaccaccaccacagccagcatcagagc
caggagcagccagacggggagagggaggaggaggaggagaaggaggaggaggggaggccc
ctgaggacagagtcttccaggagaccccagcacatccaccaccgctcctcctcccagcgg
actgagcagcaccacaacaaccaccaccaccatcatcatactggtggcggtggtagccgg
ggcaagggcctctcccggggggagacacaggactcagagacccccgagagccgggagagc
agagaaagcagagactcagcctacatagagccccgcactcacctcctgcaccaggaggaa
gaggaagaagagtttggagaggaggagtatgaggaggaggggctgggagaggcggggcac
cctcagcaggggcgctacgaggctccgcctcaccccagggaccacaaccaccatcaccac
caccaccatcaccgtggcggcactggcgaggaggcggaccacggtacgacaggacaccac
cgctccaaggagcgcaacgaacaggaccacaacgagcgcaacaagccgcgcggtcaccag
caccaccaacgaccggcccgcgaccaccaccagtactatgaccgggacagggacagggaa
ggggaggtggcccccaaaaagaggggcgacacaggggactgggccagagacccctatatt
caccagtga
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