Oncorhynchus nerka (sockeye salmon): 115130395
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Entry
115130395 CDS
T07952
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115130395 (nphp3)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
115130395 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_11
TPR_6
TPR_19
NACHT
AAA_16
ATPase_2
AAA_22
KAP_NTPase
14-3-3
DUF2225
Uso1_p115_C
AAA_19
AAA_14
ARM_TT21_4th
DUF4635
PIG-L
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
115130395
NCBI-ProteinID:
XP_029517365
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All DBs
Position
LG6:complement(17567822..17594162)
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AA seq
1301 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYTAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIMVYDPDDSDDDDNHTAVTAAGTPCDYWGGGVLGSEPSMGSMMQLQQTFRGPEFAHSLC
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLISTQETQAELDIFTQSYSP
RLRSLCEGLGHFYLNICFPEESAASYALERRQEMDRSSVCVLLLKSSITSCVLEDAEEAF
VKNPDGHPLVLYLRTVEAHPLSGPTRQLLERVNAADKAAKVKVVDHGGSPEEGASMIYTQ
LEKVIKQELLGLEGSDVDGKDSGIDEGCEEDSGDVLWDLHDEQEQIEAYQQACSAAAQLG
FQKYIDRLNDMVAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKHSPNTLFLYHFVGRPL
STSSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSSRHQGNIIIIIDSI
DQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLNPREVKSVINTEC
LAADVKLTKDQDKKLERHCRSASTCNALYVTLLAKMITNCRCAWSLERTLEQCLLCQDTM
SLYRLGLRVALDSLSTDGERHVMREMLCLVCASHNGVSESEVLAVFPDLGLPVLSSLLYT
LQRLCIVGLGCGLIRFQHLQAAEAVRLEFMDGGTCSPAYREKLIHYFSQQLSQDRVTWRV
ADELPWLLQQQEDRAKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCASEDSMIRLGNLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPSVA
LSLHQLAGVYVQWRKYGNAEQFYKQALEISENAYGSDHACVARELDSLAMLYQKQNKYEQ
AEKLRKRSVRIRQKTARQKGHMYGFTLLRRRAIQLEELTLGKDTADCAKTFNELGVLYYL
QNNLEAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALDIREKSFGPKHPSVATALVNL
AVLYCHLKKHSEALPLYEQALRVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIKEAEPSLVCGKAPSRHSSSGDTFSLRGPAPLPHAPR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcctcctccctggtgagccctggggaggtgatagaggatgcgtatgggggc
gagggtggggaggcctgtgagatacctgtggaggtcaaacctaaagcccgcctcctgcgg
agctcctttcgccgagggcccagggtgattggagccagcttcaaatccacaggctctgtg
gacctggagtacaccgccgaatacgaacggctccgtaaggagtatgagattttccgggtt
agcaagaacaatgagatcacctccatgcagaagaaggaggccaagctggacgaggagaac
aagaggctgagagctgagctgcaggctctgcagaagacctaccaaaagatcctgagagag
aaggagagtgccctagaggctaagtaccaagccatggagagagccgccacctttgagcat
gacagggacaaagtcaaacggcagtttaagatcttccgggagaccaaagagaaggagatc
caggacctgctgcgagccaagagggacttggaggccaagctacagcagctgcaagctcag
ggcatcatggtgtacgacccggacgactcggatgacgatgacaaccacaccgctgtcaca
gctgcagggactccgtgtgattactggggtggtggagtgctgggcagtgagccctctatg
ggcagcatgatgcaactgcagcagaccttcagaggaccagagtttgcccacagcttgtgc
gatgtggagggcccatttgccaatgtcagcagagatgactgggacgctgctgtggccagt
ctgctgcaggtgtctcctcacgtgtcccaggcgttatggagcaacacggtgcgctgctac
ctgatctcgacccaggagacacaggctgagctggacatctttacccagagctactctcct
aggctgcggagtctgtgtgaggggctgggccatttctacctgaacatctgtttccctgag
gagagtgcagcctcctatgccctggaacgcagacaggagatggatcggagctctgtgtgt
gtgctccttcttaaatcctccatcactagttgtgtgttggaggatgcggaggaggccttt
gtgaagaacccagacggtcatcccctggtactctacctcaggactgtggaggcccaccct
ctcagcggccccaccaggcaactgctggagcgggtcaacgccgcagacaaggcagccaaa
gtcaaggtagtggaccatggtggctccccagaggaaggagcgtctatgatctatactcag
ctggagaaagtaatcaaacaggaactgctgggtttggagggcagtgacgttgacggtaag
gattcggggatagacgaggggtgcgaggaggattcgggggacgtgctgtgggacctgcat
gatgagcaggagcagatcgaggcctatcagcaagcctgcagcgccgcagctcaactgggc
ttccagaagtacatagatcgtctgaatgacatggtggcagcccctcctcccacccctcca
ctgctggtatcagggggacccggctctgggaagtctctcctgctgtccaaatggattgag
ctgcagcagaaacactcccccaacacgttgttcctgtaccattttgtggggcgacctctt
tccaccagctctgagcctgtactcattattaaacgcctcactgtcaagctgctgcagcat
ttctggtccatctctgggttatccatggacccctccaagatcctcgaggagttccctcgc
tggctagagagactgtcttccagacaccaaggcaacatcatcatcatcatcgactccatt
gaccagatacagcaagcagagaggcacatgaagtggctgattgaccccctgccggtcaac
gtcagagtggtggtgtctgtcaacgtggagacttgtccccaggcctggagactgtggccc
accctccacctggaccccctgaaccccagagaggtgaagagtgtcatcaacacagagtgc
ctggcagctgacgtcaaactcactaaagaccaggataagaaactggagagacactgtcgc
tctgcatccacatgtaacgccctgtatgtcaccctgctagccaagatgatcaccaactgt
aggtgtgcctggtcgttggagaggactctagagcagtgtctgctgtgtcaggacaccatg
tctctgtacagattgggcctcagggtggcgttagattctctcagcacagacggggagaga
cacgtcatgagagagatgctgtgtctggtgtgtgccagtcacaacggtgtgagtgagtca
gaggtgctggcggtgtttccagacctgggcctgcctgtcctctcctccctcctctacacc
ctacagagactctgtattgtaggcctgggctgtggactcatcaggttccagcacctacag
gccgcggaggccgtccggctggagtttatggatggagggacctgctctcctgcctacaga
gagaagctcatccactacttcagccagcaactcagtcaggacagggtgacgtggcgggtg
gcagacgagctgccctggctactccagcagcaggaggacagggccaagctgcagctcagc
ctccttaacctctttgtctcccagaacctttacaagaggggccatttctctgagctgctg
gcctactggcagtatgtgggcaaagacaaaagttccatggccactgagtactttgactct
ctgaagcactatgagaagagctgtgcgagtgaggacagcatgatcaggctgggcaacctg
tatgagacactgggtcgcttcctcaaagacttgggcctgctcagtcaggcggtagctccc
ttacagaggtcactggagatccgggagacggccctggacccggaccaccccagtgttgcc
ctgtccctacaccagctggccggggtttatgtccagtggaggaagtatggcaatgcagag
cagttctacaagcaggccctggagatcagtgagaacgcctacggctcagaccacgcctgt
gtcgcacgcgaactggactccctggccatgctctaccagaagcagaacaagtatgagcaa
gctgaaaaattgaggaagaggtctgtgaggattcgccaaaagactgcccgccagaaaggc
catatgtatggcttcactctgctgcgtcggcgggccatccagttagaggagctgactctg
ggtaaagacacagcagattgtgccaagaccttcaacgagctgggagtcctctactacctc
cagaacaacctggaggctgccaaagtgttcctgactcgttctctggagatgcgtcagcgt
gtgttggggccggaccaccctgactgtgcccagtccctcaacaacttggcggccctacac
actgagaggagagagtacgagaccgctgaggacatgtacgaaagagccctggatatccgg
aagagagccctgtcccctgaccacccctccctggcctacaccctgaaacacctggcaatg
ctctacaaacgcagggggaagctggagaaggctgttcctctgtatgagctggctctggac
atcagggagaagagttttggacctaaacaccccagtgtggccacagcgttggttaacctg
gctgtactctactgccacctgaagaagcacagtgaagcgctgcccctgtatgaacaggct
ctcagagtgtatgaggacagtctgggacgctcacacccacgtgtcggagagacgctgaag
aacctagctgtactcagctatgaggagggggactttgagaaagcagcagagctctacaag
cgagccatggagatcaaagaggcggagccgtctctggtgtgtgggaaggccccgtctcgg
cactcgtccagtggggacacgtttagcctacgagggcccgcccctctcccacatgccccc
aggtga
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integrated database retrieval system
