Oncorhynchus nerka (sockeye salmon): 115130437
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Entry
115130437 CDS
T07952
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115130437
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115130437
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_CELSR2_9th
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
115130437
NCBI-ProteinID:
XP_029517445
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All DBs
Position
LG6:22536888..22728441
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AA seq
812 aa
AA seq
DB search
MLTRNCLLLFLWFVFDKGSLSLVRPPGPPLSRSRLGKENPRSLAGSMRNGASGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGESEVKYTLMGEGAGSIFTIDATTGDIHALR
SLDREVKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVMQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGIIRTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPESSAVGFAVGRIKAHD
LDIGKNAEVEYNVVPGDGDNMFDILTSEHNQEGIIILKRPLDYETKKAYTFKVDASNAHL
DPRFHSLGAFKDTATVKINILDVDEPPVFTKPSYEMDVYEDSPVGDIIGAVTAQDLDASN
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDREHIAQHNITIVATKLNSPVLTSRVAV
TIHVLDVNEFSPELAIPYESFVCENAKVGQVIQTFSAKDQDLPQNGHKFSFKPSEKDINN
KNFTIRDFGNNTAGIVTLQSGFRRRSQKIYFLPVVIQDSGYPVQSSTGILTIRVCGCESD
GSLLTCSAEAIFLPVGLSTGALIAILLCIVILLVIVVLYVGLRRQNKKESLMTSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLCNPKVIKEKLLKENRDLFRRDVKPETKPGKNQLPVSQ
DSADICNFINQRLKENDVDNSAPPYDSLATYAYEGEGSVAESLSSIESLVVDTNEDYDYL
NEWGPRFKTLAGIFGEQSDTQSDTTTTTENRL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcctgctgctgttcctttggtttgtcttcgacaaaggttccctg
tctttagtgcgcccgccaggtccaccactgagcaggagcagactgggaaaggagaatcca
aggagcctggcgggctcgatgaggaatggggcatctgggtttcagagagtcaagagggga
tgggtgtggaaccagttctttgtgctggaggagtacatggggtcagacccacagtatgtg
ggcaagctgcacactgatctggataagggcgagagcgaggtgaagtacactctcatggga
gaaggggccggctccattttcaccattgacgcaacgaccggggacatccatgccttaaga
agccttgacagggaggtgaagccttattacacactccgcgcgcaggctgtcgatatcgac
accaacaggccactggagcccgaatcagagtttgtaatcaaggtccaggacatcaacgac
aatgaaccaaagtttctagaagggccatacacagccagtgtccctgagatgtcacctgta
gggacttatgtgatgcaggtgacagccacagatgcagatgaccctacctatggaaacagt
gccagagtggtctacagcatcctccatggccagccatacttctctgtggatcccaagact
ggtataataaggacggccttgccgaacatggaccgcgaagtgaaggagcagtaccaggtg
cttatccaggccaaggatatgggaggtcagctgggaggtctggccgggaccaccaccatc
aacatcaccctcagcgacgtcaacgacaacccaccaaggttctccaaaagtttctttcac
cttagagtccctgagtcctctgcagtgggttttgctgtgggaaggatcaaagctcatgac
ttggacatcgggaagaacgcagaagtagagtacaacgtcgtaccaggggacggcgacaac
atgtttgacatcctcaccagtgaacacaatcaggaaggaatcattattctcaaaaggccg
ctggactacgaaacgaagaaggcctacaccttcaaggtagatgcatccaacgcccacctg
gacccacggttccacagcttaggggcctttaaagacacggccacagtgaagattaacatc
ctggatgtagatgagcctccagtcttcactaagccctcctatgagatggatgtgtacgag
gactcacctgtaggtgacatcatcggagcagtcaccgcccaggatctggatgctagcaac
agccctgtcaggtattccatcgactggaagagtgacctggacagctactttgacattgat
ccagtggagggaacgatttccacaaacgaactactggacagagaacatatcgcccagcac
aatatcaccattgtggccaccaaacttaatagcccagtgctgaccagtagagtggctgtc
accattcatgtactggatgtcaatgaattttcccctgaactagccatcccttacgagagc
tttgtgtgtgaaaatgccaaagtaggccaggtaattcaaaccttcagtgcaaaggaccag
gatctgcctcaaaatggtcataagttctccttcaaaccgtcagagaaggacatcaacaac
aagaacttcactatccgagactttggaaataacacagccgggatagtgactctgcagagc
ggttttcgacggcgttcccagaagatctacttcctgcccgttgtaatccaggacagcggc
taccccgtccaaagcagcacaggcatcctgaccatccgtgtgtgtggctgcgagtcagac
ggctcactcctcacctgcagcgcagaggccatcttcctcccggtgggcctgagtacaggg
gctctgatagccatcctcctgtgcattgtcattctactagtgattgtggtcctctacgtg
ggtctgagacgacagaacaagaaggagtccctgatgacgtccaaggaggacatccgtgac
aatgtgatccactatgacgacgagggcgggggcgaagaggacacccacgctttcgacatg
ggaaccctctgcaaccccaaagtcatcaaggagaaactcctgaaagagaaccgggacctt
ttccgacgtgatgtcaaacccgagacaaaacccggcaaaaaccaactgcctgtttcccaa
gacagtgcagatatctgcaacttcatcaatcagcgactgaaagaaaacgatgtggacaac
tcagccccaccctatgactctttagctacctatgcctatgaaggggagggctctgtagcg
gagtcgctcagctccatcgagtctctggttgtagataccaatgaggactatgattacctc
aacgaatggggtcctcgatttaagactctggcaggaatatttggagagcagtcggacact
cagtcagacacaacgacaacaacagaaaacagactttga
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