Oncorhynchus nerka (sockeye salmon): 115130440
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Entry
115130440 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115130440
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115130440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
bHLH_HIF1A
PAS_9
PAS_4
EGF_Sp38_C
Motif
Other DBs
NCBI-GeneID:
115130440
NCBI-ProteinID:
XP_029517454
LinkDB
All DBs
Position
LG1:39615852..39700593
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AA seq
1089 aa
AA seq
DB search
MLSNTGVYAVKKRKKPVQKTKKSPAPDVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVRS
RLDKLSVLRISVGYLKVKSFFKTTMKKSSVLFPGGDGLNMNGMNAPTFSEGDLLLQALNG
FVLVVTAEGHVFYSSPTIQDYLGFHQSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHCQSMLGDDGTHSQPRLGLFTIATPVHTPSILEIRNKTIFFQTKHKLDFTPTGVDA
RGKVVLGYSEIELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQKTGCWVW
VQANARLVYKGGRPDFIIARQRALLNSEGEENLRQRKMQLPFSFTTGEALLYETGPTLDA
TEFQTNPPKICKVESLDPQSLLGSLLKQDESVYTQPQEPQLPIDQVFMDSRALTNVASNS
WQSSMEPQGPDGVDDGDSPREVKHEGALVAMIDALERMAQDGDLCAALQGMDVGTAELME
WESTLLRLSQNSNGTGSGDTSLELDDIMTNDIFSYVEEALFKESSEGSGNQPNCSTMVNN
DPNLFTGVLDNNNQGGPFTGVVSPTTGAGQCKPGLLDKFSFVQNGSPVNDLNGISHSQVT
GNRVVGLAGQNQGGQNQAGPQQVFKSTQRLSHFGPQIPQAGLNIPILQQLQLNDIFTPSL
ELPELSNPHSSGQNESVTLSTSMAGSCAQAPNNHMGSPQIIAGQVQSNQPPPQCFPHNGL
PAAMAPNGPEEISVPQSNHLPPILVDAWASLIPSNGFVSPQIACSAPFQSLKSQKVQQWP
QNQQHQLPPSTSTMKNGHQFIPDCHSQATETQRVPLTGLWPQNTNGLYHQPQQGRLANGQ
PTPSGSCMFENVLPPLPNRNSHVDGTILPPPLSACQRRMVDPQDQSYLQWGPSEPVVDTS
AIIQDNTGISFPARPLVANITTPESLLAMQQYLSGRNRVRQTQIPSLCVVDSNGTFSSAP
LVNGTFSSSPLVNETFSSAPLVNGTFSSAPLVNGTFSSAPLVNGTFSSSPLVNGTMCFTD
HNQTNYCDF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacactggagtctatgctgtcaagaagcggaagaagcccgttcaaaaaacc
aagaaatctcctgctccagatgtggtcaagtcgaacccatccaaacgccaccgggatcgg
ctgaatggggagctggacaggctgacaggcctcctaccattccctgaggatgtgcgctct
cgcctggacaaactctctgtgctccgcatcagcgtcggctacctgaaggtgaagagcttc
ttcaaaacaaccatgaagaaaagcagtgtcctgtttcctgggggggatggcctgaacatg
aatgggatgaacgccccaaccttctccgagggggacctacttctccaggctctgaatggc
tttgtgctggtggtcacagctgagggacatgtgttctattcctctcctactatccaagac
tacctgggcttccatcagtcagacgtggtccaccagagtgtgtttgagctgatccacaca
gacgacagagccacgttcagacgacagcttcactttgccctcaaccccaagccctttgac
ccagagcagggaggagacggcatggcgagcagcagtgacatcaccaggaacatcgtgacc
tataaccctgagcagctcccaccagagaactcctccttcctggagaggaacttcgtgtgt
cgcttccgctgcctcctggacaactcctctggcttcctggctctgaacttccaggggcgt
ttgaagttcctccattgccagagcatgctgggggatgacgggacgcacagccagcccagg
ttgggcctgttcaccatcgccacccctgtccacaccccgtccatattggagatcagaaac
aagacgatcttcttccagaccaaacacaagcttgacttcacccccacgggtgtcgatgcc
agggggaaggttgtcctgggatactcagagattgagttgtgtatgagaggctctgggtat
cagttcatccacgcagctgatatgatgtactgtgcagataaccatgtcagaatgattaag
acaggagagagtggtctgaccacgttcagactgctgcagaagactgggtgctgggtctgg
gtccaggccaatgccaggcttgtctacaaaggaggaaggcccgacttcatcatcgcacgc
cagagagctttacttaattctgagggagaggagaatctacgccagaggaagatgcagctg
cccttcagcttcaccaccggggaggccctgctgtacgagaccggccccaccctggatgcc
acggagttccaaaccaaccccccaaaaatctgcaaggtggagtctctggacccccagtct
ctactgggctctttactaaagcaggacgaatccgtctacacccagccccaggagcctcag
ctacccatagaccaggtattcatggacagccgagcgctcaccaacgtggcctctaactcc
tggcagagtagcatggagccccaggggcccgacggggttgatgatggtgatagccccagg
gaggtcaagcacgagggggcgttggtagccatgatcgatgccctggagaggatggcgcag
gatggggacctgtgtgcggctctgcaggggatggacgtgggtacggcggagctgatggag
tgggagagcaccctcctcaggctgagccagaactccaatgggaccggcagcggggacacc
tccctagagctggatgacatcatgaccaacgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagcgaggggagcggtaaccagcccaactgctccaccatggtcaacaac
gaccctaacctgttcacaggggtgctcgacaacaacaaccagggtggaccatttacagga
gtggtcagccctactacaggtgccggacagtgcaagcccgggttgcttgacaaattcagc
tttgtccaaaatggctctccagtgaacgatctaaatggtatcagccacagtcaggtaaca
ggcaacagagtagttggtttggcaggacagaaccagggaggacagaaccaggcaggacca
cagcaggtgttcaagagcacccagaggctctcccacttcggcccccagattcctcaggcg
ggcctgaatatccccatcctgcagcagctacagctcaacgacatcttcaccccctctctg
gagctccccgagctcagtaacccacatagctcaggccagaatgagtctgtcacgttaagc
actagcatggctggatcctgtgctcaggcaccaaacaaccacatgggaagccctcagatc
atcgctggccaggtccaatctaaccagccacctccacagtgtttccctcataatggcttg
ccagctgcaatggcaccaaacggaccagaggagatctctgttccacagtccaaccatcta
ccacctattctggtggatgcttgggcatctttgattcccagtaatggctttgtttcaccc
cagattgcctgcagtgcaccatttcagtcactaaaatcccagaaagtgcagcagtggccc
cagaaccagcagcatcagctaccaccatccaccagcacaatgaaaaatggacaccaattc
atcccagactgtcacagtcaagccacagagacccaaagagtccctctcacaggcctttgg
ccacagaacaccaacggattgtaccaccaaccccagcaggggcgattggccaacggccag
cctactccatccggcagctgtatgtttgagaacgtcttaccccccctccccaacagaaac
agtcacgtggatggcaccattctgcctccccccttgtctgcatgccagaggaggatggtg
gacccccaggaccagagctacttgcagtggggccccagtgagccggtggtggacacgtca
gccatcatccaggacaacaccggaatcagcttcccggctcgcccgcttgtggccaacatc
accacccccgagagcctactggccatgcagcagtacctttctggacgcaacagagtcaga
cagacacagatcccaagcctctgtgtagtagacagcaatggaacattctcctcagcccca
cttgtcaatggaacattctcctcatccccacttgtcaatgaaacattctcctcagcccca
cttgtcaatggaacattctcctcagccccacttgtcaatggaacattctcctcagcccca
cttgtcaatggaacattctcctcatccccacttgtcaatggaaccatgtgctttacagac
cacaaccaaaccaactattgcgacttctaa
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integrated database retrieval system
