Oncorhynchus nerka (sockeye salmon): 115130442
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Entry
115130442 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 12-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115130442
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115130442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
SH3_10
Motif
Other DBs
NCBI-GeneID:
115130442
NCBI-ProteinID:
XP_029517452
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All DBs
Position
LG6:23818451..23911170
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AA seq
912 aa
AA seq
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MADSEGLGSGGVDLPILAPGQVYVEVEYDYEYKAKDKMISIRQGECYMLVRKTNEDWWQV
RKEEGMKAFYVPAQYVREVRRALMPPPKTLVSDGMGGTIRVKPTVLDICSTSNENLNNRL
PQESSFGSPSPTSTPSPSWGHVTPPSLPKDANQNPESPRHSKPPGVADLVLLHNNKNHHH
SNSSKLPHMRADSPPPRAPNNHHINHNKSHDSDRTLSSPGDSPGEGSEKLQNDSESGDDL
SSSSTEHMQTTSPIGQGRPESPIYTNLQELKISQSSLPTLPSSTPLHILGDWETHKDLTG
RHFYYNRATGERTWKPPRARDASGSTSSSRGDPHGMGEMEPLSSEENCHSSTYSSQSDSQ
YGSPPRGWSEELDVHGHTLYVCEHTHEKWIKHVDEQGRPYYYSSDGSRSEWELPKYNVSP
QPGDPPKSRSLERKLSDPIVLTKWRHSTYVLDLNDKECGPTVPKLSSPDFDSCPSSPKHP
SIPSEKCGVLNVTKITENGKKVRKNWTSSWTVLQGSSLLFAKGQGSGTSWSYYRSGSIPE
LLLTLLANWKRSVKPRPAVSYVHSVHERSKAATKFGGNQSKPEFTVDLRGGSVDWASKDK
SSKKHVIELKTRQGTELLIQSEIDSVINDWYRVLTDTISTHAWESDEALEEDMPESPGAE
KQDKEKDHRDSKKNRAMKTSVSMDSSDQKKTRVKLKKFLTRRPTYQAVRDKGYIKDQVFG
CSLSSLCQRENTSVPTFVTMCIDHVENTGLSIDGIYRVSGNLAVIQKLRFAVNHDEKVEL
DDSKWEDIHVTTGALKMLFRELPEPVFTYDSFNDFINAIKCSDYKQRVNMIKDLIKHLPK
PNHDTMQCLFKHLRRVIDHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQIVE
LILLEYENIFGR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagtgaggggcttggcagcggtggggttgatctgcccatcctcgcaccgggc
caggtgtacgtggaggtggagtacgactatgagtacaaggccaaagataagatgatctcc
atcaggcagggggagtgctatatgctggtcaggaagaccaatgaggactggtggcaggta
cggaaggaagaggggatgaaagccttctatgtcccagcgcagtacgtcagggaggtgcgc
cgggcgctcatgcccccaccaaagaccctcgtgtcggacgggatgggtgggacgatccgg
gtaaagcctacagttctggatatctgtagcacgtccaacgagaacctcaacaacaggcta
cctcaggagtctagttttgggagtccgtcgcccacctccacaccctcgccctcttggggg
cacgtcacaccaccttctctgcccaaggatgccaaccagaacccggaaagcccacggcac
agcaagccccctggcgtagccgatctggtgctcctacacaacaacaagaaccatcaccac
agcaacagctccaagttaccgcatatgcgggcggactctccgcctcccagggcccccaac
aaccaccatataaaccacaacaagagccatgactcggaccggactctctcctctcctggg
gactccccgggggaggggtcagagaagctccagaacgactcagagtctggagatgacctg
agcagcagctctactgaacacatgcagacgacgtctccgatagggcaaggccggcccgag
tcccctatctacaccaacctccaggagctgaagatctcccagtccagcctgcccaccctc
ccctccagcaccccactgcacatccttggggactgggagacccacaaggacctcaccggt
agacacttctactataacagagccaccggggagcgcacgtggaaaccgccccgtgcacgg
gatgctagtggcagtaccagtagtagtcggggagacccccatggcatgggagagatggag
cccctttcttccgaggagaactgtcacagcagcacgtactccagtcagtcagacagtcag
tatggatctccccctagaggctggtcagaggaactggatgtacacggacacaccctctat
gtctgtgaacatactcatgagaagtggataaagcacgtggacgagcaggggaggccgtac
tactacagctcagacggctccaggtctgaatgggaactacccaaatacaatgtgtcccct
cagccaggtgatccccccaagagtcgtagcctggagaggaaactgtcagaccccattgtc
ctgaccaagtggagacacagcacctacgtactagacctcaacgacaaggagtgtgggcct
acagtccccaagctgagttctcctgactttgactcctgcccctcatctcccaagcacccc
tcaattccctctgagaagtgtggagtcctcaacgtcaccaaaataactgagaatggcaaa
aaagtcagaaagaactggacatcgtcatggacggtgctacagggctcctcgctgctcttc
gctaaaggacaggggagtggcaccagctggtcctactaccgtagtggctccatccctgag
ctgctgctcactctgctggccaactggaagcgttcggtcaagcctcgcccagctgtctcc
tatgtccactctgtccatgagcgttccaaggctgccactaagtttgggggtaaccagtcg
aagccggaattcactgtggatctcagaggggggtcagttgattgggcctcgaaggataag
tccagcaagaagcacgtcattgagctgaagacccgtcaggggacagagctgctgatccaa
tcagagatcgacagcgtcatcaacgactggtaccgagtcctgacagacaccatcagtaca
catgcatgggagtcagatgaagccttagaggaggacatgcctgagtcccccggtgcagaa
aaacaagacaaggagaaagaccacagagactccaagaaaaacagagcgatgaagacatct
gtgagtatggactcctcggaccagaagaagaccagagtaaagctgaagaagttcctaacc
cgccgacccacctaccaggccgtcagagacaagggctacattaaagaccaggtgtttggc
tgcagcctgagcagcctgtgtcagagggagaacacttcggtgcccactttcgtcaccatg
tgcatcgaccacgtggaaaacacaggtctgagtatagatgggatatacagagtgagtgga
aacctagctgtgatacagaagctgcgctttgctgtcaatcacgatgagaaggtagagctg
gatgacagtaaatgggaagacatccacgtcactacaggagccctgaagatgttattcaga
gagctgcctgagcccgttttcacctacgactctttcaacgactttatcaacgccatcaaa
tgctcagactacaagcagcgggtgaatatgataaaagacttaatcaagcatttgccaaag
ccgaatcacgacacaatgcaatgcctcttcaagcatctcagaagggtgattgatcatggg
gaggccaaccgtatgacgacccagagcgtagcgatcgttttcggccccaccctgctcaga
ccggagacggagacgggaaacatcgctgttcacatggtctatcagaaccagattgttgag
ctcatcttactggagtatgagaacatattcggcaggtag
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