Oncorhynchus nerka (sockeye salmon): 115130444
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Entry
115130444 CDS
T07952
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115130444
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115130444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
115130444
NCBI-ProteinID:
XP_029517459
LinkDB
All DBs
Position
LG6:24093768..24185303
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AA seq
1193 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRWDEAREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPCQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPASPSSTTRTQTRDKPLQEQ
LPLNQIKSEPMDYEYKPIVVSPAAGAAGVNGHGGGVFNGGAAAPLQGAVQAVMLPTMGLV
SPISINLADLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQD
GNATKIIINYSLDPSQTQTQLTAQNLKKEPPTLATTPGQAQAATEPSSKTQQKLPEDLTV
SRPPRSKEEKMEEETTKTCLLCNECPNGLDALHTLKHCKKASGLRINGDKSKSAIDSLLS
EGFGDQPKNLLSLLKAYFALNVEPTKEVLSKISDSVSLPADVVKKWFDKMQSGQVSLGAP
TPPSEEEGPLSECHGAIVVSPKVRSEQNTESPTLMQSSPAEATPAEVNGSGPCPDSPTPL
NLTTGGAVPAKPSSSDSTEVPLDLSLPKPLREETAATAASSQATVYSHQDEPLNLTKTCT
TKKELPLSAGAAGHHMTSQTLSFYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVPCL
RALTTNNNQTILIPQLAYTYTTTATASSPAGTETQEKTTLQINGIKEERQDTSSEGVYTM
EEQNDSDTTPSRNKMRKMESGLYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAF
KHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGGQGGVGEE
VLEIESPVGLGLEGEQPEQSDSRPTSSPPSHLDSDERGSSTREEEEESDEEDMDTVAGEA
VEGDPDSVLDMDDIQVVRIGDEGGEEEEEEEEREEEGEDTGQEGGENAEEEEQGVKRIVV
GGEEEEGEEEEEEGLVVGVEVKEEQEEKEVTGEKAHTRQEEVKENREKEEEHGGEKEQDE
KDVEEEQSEQAQEEVKEETMDTEEAVTSEGKEESGEVMKENEGETNGNTVSED
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtagtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtctggcagacggggctgactgtgacagcaacgtaccc
agtgaagatcacaacggagaccgctgggatgaagcgagggaggagtgtggttcggatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccctgccaggggacgcccgaggccagcgga
catgacgagaatggcactccggatgcgttctcacagctcctcacctgtccctactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcatcacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgtcccctgcccgccaaggcctcccaatgcccatccccagccatg
cccgcctcgccctcctccaccacacgcacccagacccgagacaaacccttgcaggaacag
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatagtagtg
tctccagcagcgggggcagcaggagtgaacggtcacggaggaggggtgttcaacgggggt
gcggctgctccactgcagggtgcggtgcaggcggtgatgctccccaccatgggcctggtc
tctccgatcagcatcaacctggcagacctacagaacgtcttgaaggtggcggtggacagt
aacatgatcagacagatgttggagaacaatgctaagtcagcggggactggcatgggggcg
acaggtgttcctcaccagcagctcatctcagccatcagtctgcccattatgggtcaggac
ggcaacgccaccaagatcatcatcaactacagcctggaccccagccagacacagacccag
ctcactgcccagaacctgaaaaaggagcccccgaccctggctacaacaccaggccaggcc
caggctgccacagagccctccagcaagacccagcagaaactcccagaggacctgacagtt
agcaggccccccaggagcaaagaggagaagatggaagaggagactactaagacctgcctg
ctttgtaatgagtgccccaatggtctggacgctctccacacactcaagcactgtaagaaa
gcctcaggcctcaggatcaatggggacaaatcaaagtctgccatcgattcattattgtct
gaggggttcggggaccagcccaagaaccttctgtccctcctcaaggcctacttcgcctta
aatgttgagcccaccaaggaggtgctcagcaagatctccgactcggtcagcctgcctgcc
gacgtagtcaagaagtggtttgacaagatgcagagcggtcaggtctcactaggggccccg
acccctccgtctgaggaagaagggcccttgtctgagtgtcatggggccattgttgtgtcc
cctaaagtaagatcagagcagaacacagagagccccaccctgatgcagtccagcccagct
gaggccactccggctgaggttaacggctctgggccctgcccggactcccctacaccgcta
aacctgaccaccgggggggccgtcccagccaaaccctcctcctcagacagcacggaggtc
cccctggacctgtcgctaccaaagcccctccgagaggagaccgctgccaccgcggcctct
tcccaagccactgtttactcccatcaggacgaacccctgaacttgacgaagacttgcaca
accaagaaagaacttccgctctctgccggcgccgcaggccaccacatgactagccaaacc
ttgtccttttacaccgccggcccacaaagtgccaaccccatcagcatcatgaccactcag
ctgcccagcgggaccatctatgccatcactgatcagggcagcacgggtgtgccctgtctc
cgggctctcaccaccaataacaaccagactatcctcatcccacagttggcctacacctat
accactacagctacagccagcagccctgcagggacagagacacaggagaagaccacactg
cagatcaacggcatcaaggaggagcgtcaggacacaagctcagagggcgtgtataccatg
gaggagcagaatgactcagacaccaccccttccaggaataagatgaggaagatggagagt
gggttgtacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctgctccga
cataaatatgaacacacaggcaagagaccccacgagtgtggcatctgcaggaaggccttc
aaacacaagcaccacttgatagaacacatgcgtctccactccggagagaaaccctaccag
tgcgacaagtgtggcaagcgcttctctcactcaggctcttactcccagcacatgaaccac
cgctactcctattgcaagaaggaggcgcagggaggaggtcagggaggtgtaggggaggaa
gtgctggagattgagagccccgtggggttgggcctggaaggggagcagccggagcagtca
gacagcaggcccacctcctcccctccctcccacctggactcggacgagcgagggagcagc
accagagaggaggaggaggagagtgatgaggaggacatggacacagtggcaggggaggcg
gtggagggagatccggacagcgttctggatatggatgatatacaagtggtacggatagga
gatgagggaggggaagaggaggaggaggaggaggagagagaggaggagggggaagacact
ggtcaggaggggggagagaatgcagaagaggaagagcaaggagtgaagagaatagtggta
gggggtgaagaggaggaaggagaagaagaggaagaggaggggttagtagtgggggttgaa
gtaaaggaagagcaggaagaaaaggaggttacaggggaaaaggcacatacaaggcaagag
gaggtgaaggagaaccgtgagaaagaggaggaacatggaggagagaaggagcaggatgag
aaggatgtggaggaggagcagtcagagcaggctcaggaggaggtgaaggaagagacaatg
gacacagaggaagcagtgacctcagaggggaaggaagaatcaggggaggtcatgaaagag
aatgaaggtgaaacaaacgggaacactgtttcagaagactag
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