Oncorhynchus nerka (sockeye salmon): 115130455
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Entry
115130455 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115130455
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115130455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_9
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
115130455
NCBI-ProteinID:
XP_029517484
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All DBs
Position
LG1:39712550..39761689
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AA seq
1003 aa
AA seq
DB search
MYAGRKRRKPVQRAVKPPQSEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTTSLDKLS
ILRLSVSYLRAKNFFTVALKNCTCSADNSKATGLEDSWLPEGELLLQALNGFVLVVTNDG
TIFYSSHTIQDYLGFHQTDIMHQSVYELVHTEDQQELRRNLHWALNPPAIMDTLGKSSSD
VEPESSTTVTYNPEQLPPENSSFLERNFVCRFRCLLDTSSGFLALSLQGRLKFLRGQNQR
QENSVKAPPQLALFAIATPLQPPSILEIRTKNMTFRTKHKLDFTPMACDAKGKIVLGYTE
AELRARGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKDNLWKWVQANARLVYK
NGKPDYIIATQRPLMEEEGGEHLRKRSMHLPFTFATGEALLYQSSHPIGRFNHSTQGSEK
NGNKSKKGRIDRVSRDGLDPGSLLGALMSQAESVYVCQPTLEPQLSFHGSLFGDRVGFSD
SDPTALLQGWDESSNGVVGPGLPEPASSFDPMLATLDSLSLGGPGGGVDRNGDGGNGENC
SNGELFGALEGLSAEDLELLLLDERMIRVEMDPERVPTLDDLLTNDEILSYIHDSLEAKT
DGAEDGDQVPSTIPGTNGEWTSLHILANTGVPVDDCHTPQTLLNGKASEPDGDHHWRQAH
QRQHYLQQQQALVQIPLPHSHAKHPGAMLNGVCGIPNTHTEHLPAGKQQWQDNSYCPPGE
TTLNSNPPGQTTQNSNPPGQTTQNSNPPGQTTLHSNPSGQTTLHSNPSGQTTLHSNPSGQ
TTLYSNPSGKTTLSSNPSGKTTLNSNPPGETTLNSNPCGQTTLNSNPSGKTTLNSNPSGK
TTLNSNPSGQTILTSNPSRETILNSNPCLNDGQVPLLTHTTVDACMNYTMADVPTMDYTI
NRCTYGGNGQHHGTGAAVSSFQRMNHKQLQQEKLPPPLAQVQCPPPSATVEQILVVGHSS
LEANGMVTSDIPHHPNHSKMENGCILNGTYSGGCVLPNRSGAL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacgtaaaaggagaaaaccagtccagagagccgtaaaaccgccacaatca
gaaggggccaagtcgaacccctcgaagcgccaccgggaccgtctgaatggagagctggag
aggctggccagcctcctccccttccctgaggaggtcaccaccagcctggacaaactctcc
atcctccgccttagtgtcagctacctccgggccaagaacttcttcaccgttgccctgaag
aactgtacttgcagcgctgacaacagcaaagccacaggattggaggacagttggctgccc
gaaggagaactgttgctgcaggctctgaacggcttcgtcctggtggtcactaatgacggg
accattttctactcctctcacaccattcaggattacctgggcttccaccagactgatatt
atgcatcagagtgtgtatgagttggtccacactgaggaccagcaggagctgaggaggaac
ctccactgggccctcaacccacctgccatcatggacacactgggaaagtcctcctcagat
gtggagccggagagcagcaccactgtgacctataaccctgagcagctcccaccagagaac
tcctccttcctggagaggaacttcgtgtgccgcttccgctgcctcctggacacctcctct
ggcttcctggccctgagtctgcagggcaggctgaagttcctgcgtggtcagaaccagcgg
caggaaaacagtgtcaaggcgccgccccagctggccctgtttgccatcgctacgcctctc
cagcccccctccatcctggagatcaggaccaagaacatgaccttcagaaccaaacacaag
ctggacttcacccccatggcctgcgacgcaaaggggaaaattgtgcttgggtatactgaa
gctgaacttcgggcgcgaggctctgggtatcagtttatccatgcggcggatatgttgtac
tgcgctgagaaccatgtccgaatgatgaagacaggggagagcggtctgaccgtgttcagg
ctcctcaccaaggacaacctctggaagtgggtccaggccaacgccaggctggtgtacaag
aacggaaaaccggactacatcatcgccacacagaggcctctgatggaggaggaaggaggc
gaacacctacgtaaacgttccatgcacctcccctttaccttcgccacaggagaggccctg
ctctaccagtccagccatccaattggacgcttcaaccacagcacccagggctccgagaag
aacggcaacaagtccaagaagggccggattgacagggtgtccagggatggcctggacccg
ggctccctcttgggggcgctgatgagtcaggctgagtctgtatatgtctgccagccgacc
ttggagccccagctgtccttccacggcagtctgttcggagaccgggtcggtttctctgac
tccgaccccaccgccctgctccagggctgggatgagtcgtccaatggagtggtaggtccg
ggccttccagaaccggcgtcgagcttcgaccctatgctggcgaccctggactccctgtcc
ctggggggtccggggggtggggtggaccggaatggggatggaggcaatggggagaactgt
tccaacggggaactatttggggctttggagggactgagcgctgaggacctggagctgctg
ctgctggacgagaggatgatccgggtggagatggaccctgagcgggttcccaccctggat
gacctgctgaccaacgatgaaatcctgtcctacatccacgactccctggaggcaaagaca
gatggggcagaggacggggaccaggtaccctccactatcccaggaacaaatggagaatgg
acatccctacacattctagccaatacaggggtaccggttgatgactgtcacaccccccag
actctgttaaatggaaaggcatcagagccggatggggaccatcactggcggcaagcccac
caacgtcaacactacctccagcagcagcaggccctggtccagataccgctccctcacagc
catgccaaacatccaggcgctatgctcaacggagtgtgtggcattccaaacacacacaca
gagcatctcccagctggcaaacagcaatggcaggacaatagctactgcccccctggggaa
accaccctgaacagtaacccccctgggcaaaccacccagaacagcaacccccctgggcaa
accacccagaacagcaacccccctgggcaaaccaccctgcacagcaacccctctgggcaa
accaccctgcacagcaacccctctgggcaaaccaccctgcacagcaacccctctgggcaa
accaccctgtacagcaacccctctgggaaaaccaccctgagcagcaacccctctgggaaa
accaccctgaacagcaacccccctggggaaaccaccctgaacagcaacccctgtgggcaa
accaccctgaacagcaacccctctgggaaaaccaccctgaacagcaacccctctgggaaa
accaccctgaacagcaacccctctgggcaaaccatcctgaccagcaacccctctcgggaa
accatcctgaacagcaacccctgccttaacgatggccaggtacctctcctcacacacacc
accgtagacgcttgtatgaattacactatggctgatgttcccaccatggactataccatc
aacagatgtacatatggggggaacgggcagcaccacgggaccggggctgccgtttcgtcc
ttccagaggatgaaccacaagcagctgcagcaggagaagctgccccctcccttggctcag
gtgcagtgccctcctccctctgctacagtagagcagatccttgtggttggacactcttca
ctggaggccaatggcatggtgacctctgacatcccacaccaccccaaccacagtaagatg
gaaaatggctgcattcttaacgggacctactcaggaggctgtgttctgcccaataggagt
ggtgccctctaa
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