Oncorhynchus nerka (sockeye salmon): 115130472
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Entry
115130472 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115130472
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115130472
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115130472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-RING_4
zf-rbx1
Prok-RING_4
zf-C3HC4_4
IBR_1
zf-UDP
TerY_C
zf-Tbcl_FmdE
zf-ANAPC11
DZR
IBR
Motif
Other DBs
NCBI-GeneID:
115130472
NCBI-ProteinID:
XP_029517509
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All DBs
Position
LG6:complement(27379992..27382874)
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AA seq
195 aa
AA seq
DB search
MSSTVSTTQRKRRTGVPSNSRRTTKSSRVTTTSVRPRAAASAAVPETIDVLESSRTESEE
VVDLTCEGSELTVVDLTSNDSVVVVDEGPHGRREADSESYVLSSDEEEDTNGGLSADLLS
SLQASSRARSTPGTVSCPVCMDAYAEIIESGRLVVSTKCGHLFCSHCLRDSLLRSHTCPT
CRKKLTHKQCHPIYI
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacagtaagtacaacacagaggaaaagaaggactggagtcccttcaaattcc
agacgcacgaccaagagtagcagagtcaccacaaccagtgtgcgacctcgtgctgcagca
tcagcagcagtcccagagaccattgatgtgctggaaagcagcaggactgagagtgaggag
gtggtggacttgacatgtgaaggttctgagttgactgtggttgacttgaccagcaatgat
tctgtggtggttgtcgatgaagggcctcatggcagacgtgaagctgacagtgagagttat
gtactgagcagtgatgaggaggaggatactaatggaggcctcagtgccgacctcctgtcc
tctctacaggccagcagtagagccaggtctactccagggacagtcagctgcccagtgtgt
atggacgcctatgctgagatcattgaaagtgggaggctagtagtctccacaaaatgtggt
cacctgttctgcagtcactgcctccgcgactcactgttgagatcccacacttgcccaacc
tgtagaaagaaactgacccacaagcaatgccaccccatatatatctga
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