KEGG   Oncorhynchus nerka (sockeye salmon): 115130484
Entry
115130484         CDS       T07952                                 
Name
(RefSeq) transcription factor Sox-21-B-like
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:one03000]
    115130484
Transcription factors [BR:one03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    115130484
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1 VirB4_TrbE_N
Other DBs
NCBI-GeneID: 115130484
NCBI-ProteinID: XP_029517535
LinkDB
Position
LG1:complement(40125929..40128259)
AA seq 241 aa
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSGLSHGALSEHL
LGNPDKAAAAAAAARVFFNPSMSTNPYSFFELGSKMSELSSPSFPYPSLGYPGGTAFSGT
GGIGGTHTHTHSHPAPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLDYPAYAAA
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctaaaccaatggatcacgtaaaacgaccgatgaatgccttcatggtttggtccaga
gcgcagagaagaaaaatggctcaggagaacccaaaaatgcacaactccgaaatcagcaaa
agattgggagcggagtggaaacttctcactgagtcggagaaaaggccattcattgacgaa
gctaaacgactgagagccatgcacatgaaggaacaccctgactataaatacagacctagg
cgaaagccaaagactctgatgaaaaaagacaagtttgccttcccagtgccctacaatctt
ggggagcacgacgcgcttaaagttagcggtttatctcatggagcactttccgaacaccta
ttagggaacccggacaaggcggcagcggcggccgcagcagcgagagtctttttcaacccg
tccatgtccacgaacccctattcgttttttgagctcggatcgaagatgtcagagctatcc
tcgccctcgtttccttacccatctctgggctaccctggtggcacggctttctctggaact
ggcggtatcggtggaactcacacccacactcactctcatccagccccgggcaacccaggc
tacatgatcccctgtaactgtacgggctggccctctgcgggtctccagccaccgttggcc
tacatcctactccccgggatgggcaaacctcaacttgactaccctgcatatgcagcggcg
ttatga

DBGET integrated database retrieval system