Oncorhynchus nerka (sockeye salmon): 115130505
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Entry
115130505 CDS
T07952
Name
(RefSeq) T-cell immunoglobulin and mucin domain-containing protein 4-like isoform X1
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
fn3
V-set
Ig_2
Psg1
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
115130505
NCBI-ProteinID:
XP_029517568
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Position
LG6:31291121..31298282
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AA seq
552 aa
AA seq
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MDSYISCCWLVLYLFFGGGSTVTIQGYVGDVVTLTCKYDARHYGTLSVCWGRGHIPNSGC
GNEVLRTEGVKVTHRASVRYNLQGDLRAGDVSLTITQAQVKDSGLYGCRVDIPGWFNDQK
HHLALVIKPAPETTPEPWISRESTTVGYAKAPETTPEPWISRESTTVGYAKAPETTPEPW
ISRESTTVGYAKAPETTPEPWISRESTTVGYAKEQTTTMQTTMGLSVPPDPPRVAIQEIS
ARSISVWWSAGFDGNTPITGFHLECKSQSDSWVDGVRGSNILPWKRETAVNDLRPFYTYN
IRMFTKNDMGLSKPSNELTITTKEAAPDGPPQDVKLEALSSHSIRVTWRAPELSLQNGLI
RGYQLRYGEYSPQERLPVRVVHLMDGSESFTMNSLQEATKYSVTLHTINRAGLGPSSQEH
VCSTLTNDDQQHMTTTQATTALQTEHSTSTIATTTSSTETWLLVTDSPTQGQRVDDFSTT
RALSNSTTDPALSKKEQSGHLVAILVPVLVLGLLVVMAIIWQFRRTTLKKGNWKILWKNN
DFLSFGDSEPAL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggactcatacatctcctgttgctggctagtgctctaccttttctttggcggtggttct
acagtaaccatccaaggctatgtcggtgacgttgtgaccctaacatgtaagtatgacgcc
cggcattatggtacgctctctgtctgctggggtcgtggtcacatccccaacagcggctgt
ggcaatgaggtcctcaggacggagggagtcaaagtgacccacagggcttcggtccggtac
aatctccagggtgatctgagggcaggggatgtctctctgaccatcacccaagcacaggtg
aaggattctgggttatatggctgccgtgtggatatacctggatggttcaatgaccagaaa
caccatctggcactcgtcatcaagcccgctcctgaaacaacccctgaaccgtggatctct
agagagagcacaacagttggctacgctaaagctcctgaaacaacccctgaaccgtggatc
tctagagagagcacaacagttggctacgctaaagctcctgaaacaacccctgaaccgtgg
atctctagagagagcacaacagttggctacgctaaagctcctgaaacaacccctgaaccg
tggatctctagagagagcacaacagttggctacgctaaagagcaaaccacaacaatgcag
acaacaatgggtttgtcagtacctccagaccctcccagagtggcaatccaagaaatatca
gctaggtccatctctgtatggtggagcgctggcttcgatggaaacacccccatcacaggt
ttccacctggaatgcaagagccaatcggactcctgggtagatggagtacgaggcagcaat
attctgccttggaagagagagaccgctgtcaatgacctgcgacccttttacacctacaac
atccgcatgttcaccaagaacgacatgggcttgagtaaacccagcaacgagctcaccatc
accactaaggaagcagcccctgatggtcccccacaggatgtgaagcttgaagccctttcc
tcccacagcatcagagtcacatggagggcccctgagttgtccctccagaacgggctgatc
cggggctaccagctccgctacggtgagtacagtccccaagaacggcttcctgtcagggtg
gtgcatctgatggacggatcagagagcttcaccatgaacagcctgcaggaggcgacaaag
tacagtgtgacgctgcacaccatcaacagagcaggcctggggccgtcttcacaggagcat
gtctgctccactctgactaatgatgatcagcagcatatgacaacaactcaagcaacaaca
gcacttcagacagaacattcaacctcaaccattgcgacaacaacatcttcaactgagaca
tggctgcttgtcactgacagtcccactcaaggtcagagggtagacgacttctcaactact
agagcactaagtaactctacgactgacccagcattgagtaaaaaagaacagagcggtcat
cttgttgccatcctagtgccagtgctggtgctggggctgcttgttgtcatggcgatcata
tggcaatttaggcgtaccacattgaaaaaaggcaactggaaaatattatggaagaacaac
gactttctgtccttcggggactccgagccagcactgtag
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