Oncorhynchus nerka (sockeye salmon): 115130535
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Entry
115130535 CDS
T07952
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115130535
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115130535
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115130535
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115130535
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115130535
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115130535
CD molecules [BR:
one04090
]
Proteins
115130535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
115130535
NCBI-ProteinID:
XP_029517639
LinkDB
All DBs
Position
LG6:complement(32963521..32982380)
Genome browser
AA seq
985 aa
AA seq
DB search
MELYLAFLLGILPTAAQEWRRPVIKLNSEVVVGSEVVLNPGTPLVLRCEGDGPVNWLTRL
SKHKSLISKGNGRVRTFRVDRPSAEHTGTYKCEYTSVNVKVRDLFSTVHVYVKDPDSLFW
TSSASLRVVRKEGEDHLLPCLLTDPEATDLGLRMDNCTSVPPGMNYTADPRRGILIRNLH
PSYNADYVCSAKLHGVERTSKTFNLNIIQRLRFPPYVFLEKDEYVHIVGEKLSIHCTTHN
PNFNYNVTWNYSSKKRFTIEQKVQSVDSNRLDIESILTIPVVDQSDTGNITCIGTNEAGV
NKSTTSLMVVEEAYIRLSPQLSSKLAHQGLSIDVNEGEDLKLSVLIEAYPQIIGHHWDTP
TASSTQETTFTPYNNRYSATLLLKRMIAQEQGQYTFYANSSMANASITFQIQMYQRPVAV
VRWENITTLTCTSFGYPAPIILWYQCSGIRTTCNENATGLQMPAPLLAQTVEVQREEYGA
VEVQSVLTLEPSSHRMTVECVAFNLVGVGKDTFAMDVSNIMFTSTLLGAAGVLALLLLLL
MVLLYKYKQKPRYEIRWKIIQASEGNNYTFIDPTQMPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGEDDNAMRVAVKMLKARAHSDEREALMSELKILSHLGQHKNIVNLLGAC
TQAGPVLVITEYCSHGDLLNFLRHKQETFLNFVMNIPAVPEETSDYKNLCEGKQFIRSDS
GISSVCSDSYLEMRPGPQPVNSSLDSVCEDGGPDSWPLDMEDLLRFSYQVAQGLDFLAAK
NCIHRDVAARNVLLTDLRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCLY
TVQSDVWSYGILLWEIFSLGKSPYPSILVDTKFYNMIKCGYQMSRPDFAPPEMYTIMKMC
WNLEPTERPTFSKISQLIERLLGEEPERPDQQQQNIQLQQDMTVEELEPCDDNDEPKCCD
GSCDQSCEHEEEEQPLVKTNSYQFC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtacctggcctttctgctggggatcctgcccactgcagctcaagaatggcgg
cgtcctgtgatcaagctaaactcagaggtcgtggttgggtctgaagtagtactgaaccct
ggcaccccattggtcctgaggtgtgagggggatgggccagtcaactggctgacccggttg
tccaaacacaagagcttaatctccaagggcaatgggagagtcagaaccttcagggtggac
cgcccctctgcagaacacactgggacatataaatgtgaatataccagtgtgaacgtcaag
gttcgggacttgttctctacggtgcacgtgtatgtgaaagacccagacagcctgttttgg
accagcagtgcgtccctgcgtgtggtgaggaaggagggtgaggaccacctgctcccctgc
ctgctgaccgacccagaggccacagacttggggctccgcatggacaactgtacctccgtg
cccccagggatgaactacacagcagacccccgcagaggcattctcatccgcaacctccac
cccagctacaatgctgactatgtctgcagcgccaaactccacggggtggagaggacttcc
aagactttcaacctcaacatcatccaaaggctgcgtttcccaccttatgtattcctggaa
aaggatgagtatgttcatatcgtgggcgagaagctgagcatccactgcaccacacacaac
cccaacttcaactataatgtcacgtggaattacagctccaaaaagagatttacaatagag
cagaaagtccaatcagttgacagtaaccgtctggacattgaaagcatcctgaccatccct
gtagtggaccagtcagacacaggcaacattacctgcatcggcaccaacgaggctggagtc
aacaaatctaccacctccctgatggttgtagaggaggcatacatccgtctttctccccag
ctgtcctccaagctggctcaccagggcctgtccattgacgtgaacgagggggaagacctg
aaactcagtgtcctgatcgaggcgtaccctcagatcataggccatcactgggacacccct
acagcctcctccacgcaggaaacaacctttacaccctataacaacaggtattccgctacc
ctgctgctcaagaggatgattgcacaggagcagggccagtacaccttctatgccaatagt
tccatggccaacgcatccattacattccaaatccaaatgtatcagaggccggttgctgtg
gtgagatgggagaacatcaccaccctcacgtgcacgtcgtttggttaccctgctcccata
atcctctggtaccagtgctctggaatccgaaccacgtgcaatgagaacgcaacaggtctc
cagatgcctgctcctctcttggcccaaacagtcgaggtccagagggaggagtatggagcg
gtcgaggtccagagcgtcctgacattggaaccgtccagccataggatgaccgtggagtgt
gtcgccttcaacctggtcggagtcggtaaagacaccttcgccatggacgtttccaatata
atgttcacctccactctattgggagcagctggtgtgctggcccttctcctcctgctactc
atggtcctgctctacaagtacaaacagaaaccgagatatgagatccggtggaagatcatc
caggccagtgaaggaaacaactacacctttatcgacccaactcagatgccgtacaatgag
aagtgggagtttcccagggacaagctcaagctaggaaagatcctaggagccggggccttt
gggaaggtggtggaggccacagcctatggtctgggggaggacgacaatgcgatgcgagtg
gctgtaaagatgctcaaagccagggcccactcagatgagagagaggctttgatgtcagaa
ctgaagattctgagtcacctgggacagcacaagaacatcgtcaacctcctgggagcctgc
actcaggcgggacctgtactggtgatcactgagtactgtagtcatggcgaccttctgaac
ttcctgcgacacaagcaggagaccttcctgaactttgtcatgaacataccagcggtacca
gaggagaccagtgactacaagaacctctgtgaggggaaacagttcatcagaagtgatagt
gggatatccagtgtgtgttctgacagctacctggagatgaggcctggtccccagcctgtc
aactcctctctggactctgtgtgtgaggatggtgggccggactcgtggccgttggacatg
gaggacctgctgagattctcctaccaggtggctcagggcctggacttccttgcagccaag
aactgtatccaccgggatgttgcagctcgaaacgttctcctgacagacctccgtgtggct
aagatctgtgacttcggcctggcacgtgacatcatgaatgactccaactatgtggtgaag
ggcaatgcgcgtctgccagtgaagtggatggctccagagagtatctttgactgtctctac
actgtccagagtgacgtctggtcctatgggatcctgctatgggagatcttctctctagga
aaaagcccctaccccagtatcctggtggatactaaattctacaacatgatcaagtgtggt
tatcagatgtctcgaccagacttcgcacctccagagatgtatacaatcatgaaaatgtgc
tggaatctggagccaacagagcgaccgaccttcagcaagatcagccagctgattgaaaga
ttactgggtgaggagccagaacgtccagatcagcagcaacagaacatccagctgcagcag
gacatgacggtcgaggagttggagccgtgtgatgataatgatgagcctaagtgttgtgac
ggctcctgtgaccagtcgtgtgagcacgaagaggaggagcaaccactggtgaagaccaat
agctatcagttctgctga
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