Oncorhynchus nerka (sockeye salmon): 115130555
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Entry
115130555 CDS
T07952
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
one04261
Adrenergic signaling in cardiomyocytes
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115130555
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115130555
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115130555
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115130555
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115130555
03036 Chromosome and associated proteins [BR:
one03036
]
115130555
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115130555
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115130555
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115130555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
115130555
NCBI-ProteinID:
XP_029517682
LinkDB
All DBs
Position
LG6:33364124..33385894
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AA seq
288 aa
AA seq
DB search
MDLMVEVSPRRVFANAHTYHVNSISVNSDHETYMSADDLRINLWHLGITDRSFNIVDIKP
VNMEDLTEVITAAEFHPHHCNLLVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSNRS
FFSEIISSVSDVKFSHSGRYLLTRDYLTAKVWDLNMENKPLEIYQVHDYLRSKLCSLYEN
DCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCQ
GGKRRKDDISVDSLDFTKKILHTAWHPTENIIAIAATNNLYIFQDKFN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatctgatggtggaggtgagtcctcggcgtgtgtttgccaacgcccacacctaccac
gtcaactccatctccgtcaactccgaccacgagacctacatgtcagctgacgacctgagg
atcaacctctggcatctgggcatcaccgaccgcagcttcaacattgtggacattaagcca
gtgaacatggaggatctgacagaggtgataacagcagcagagttccaccctcaccactgt
aacctgttggtctatagcagcagtaagggaactctacggctctgtgacatgagagaggcc
gcactgtgtgacaaacactccaaactgtttgaggagccggaggaccccagtaaccgctct
ttcttctcggaaataatctcgtctgtgtcggacgtgaagttcagccacagcgggcgctac
ctgctgaccagagactacctcaccgccaaggtgtgggacctcaacatggagaacaagccc
ctggagatatatcaagtgcatgattacctccgcagcaagctgtgctccctttatgagaac
gactgcatctttgacaagtttgagtgtgcctggaacggctcagacagtgtgatcatgacg
ggggcctacaacaacttcttccggatgtttgaccggaacacaaagcgtgacgtgaccctg
gaggcgtccagggagagcagtaagccccgggccgttctcaagcctcgccgcgtctgccag
ggcgggaaacgtcgcaaggatgacatcagcgtggacagcctggacttcaccaagaagatc
ctgcacacggcctggcaccccacggagaacatcatcgccatcgctgccaccaacaacctg
tacatcttccaggacaaattcaactag
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