Oncorhynchus nerka (sockeye salmon): 115130567
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Entry
115130567 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: protein diaphanous homolog 1-like
KO
K05740
diaphanous 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115130567
09142 Cell motility
04820 Cytoskeleton in muscle cells
115130567
04810 Regulation of actin cytoskeleton
115130567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115130567
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
115130567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
Drf_FH1
FH3_FHOD1-3
Drf_DAD
ZoocinA_TRD
Motif
Other DBs
NCBI-GeneID:
115130567
NCBI-ProteinID:
XP_029517691
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Position
LG6:33917529..34041832
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AA seq
1185 aa
AA seq
DB search
MDPNSGNSASASKSKKDKKEKKNYEDGDGKKKFKLKRLIPDELERFTSMRMKKDKEKPHA
AGQRHSNAAHYEVPTQGTMLHDHPDEYVLELFEQMLVDMNLNEEKQRPLRAKDIVIKREM
VSQYLHTSKAGQNQKESSKSAMMYIQELRTEPRDAQLLGCLESLRVSLNNNPVSWVQNFG
VEGLVLLLNIMRKIQEERDEYPNMGMKCQHEIVRCLKAFMNNKYGLKAMLTSAEGILLLV
RAINPRVPHMMVDVVKLLSAICILEHPDNLHERVLEAITEEAEKQDNERFQPLLLGMNKP
NIALKNGCMQLINALISRGEELDYRIHIRSELLRLGLRDLLTDIRTIENEELRVQLSVFD
DQAEDDSDELQARLNDVRIEMDDVTEVFQILMNTVKDSKAETHFLSLMQHLLLVRNDYMV
RPQYYKLIDECIAQIVLHRNGADPDFKCRNLSLDVEGLIDNMVDKTKVQSSEAKAIELEK
KLNAELTARHELQAELKKMEGDYEHRVQELATEKEILGSEKQARESENETLLGQINTFKE
QIETLNKDLEEAKTRVVTVHVPVGPAPPTAPPLPGQVRMPVPPPPPLPGQTFLSPPLPGM
PCPPPPPPLPGMPSPPPPPPLPGMPAPPPPPPLPGSLXPPPPPPLPGMPGPPPPPPLPGM
PGPPPPPPLPGGPGMPPPPPPAPGMGMPPPPPGMGGWGAPVPPPLPFGLSPKKEYKPEVQ
LKRANWSKIGYEDLSEKSFWTKANEDRYENNELFAKLTLAFSSQTKTSKAKKDQEGEEEK
KTTQKKKVKELKVLDSKSSQNLSIFLGSFRLPYEEIKNVILEVNEKLLSESMVQNLIKQL
PEQETLNVLGEMKDEYEDLAEAEQFGVVMSTVKRLKPRLTAILFRLQFEEQLNNIKPDVV
SVTAACEELRKSATFSQLLQIILLVGNYMNAGSRNAKAFGFSISYLCKLRDTKTADLKQT
LLHFLADVCQEQYPDVMTFPDELIHVEKASRVSAETLQKNLEQMGRALKSLDKDLETFPP
PQSDRDMFIEKMNSFVGTARVQYEKLDMMHKNMEKQYSDLGDYFVFDPRKISVEEFFGDL
NNFKNMFQQAVKENAKRREAEEKIKRAKLAREKADREKEEKQKRSQQLDLNEEGDETGIM
DGLLEALQSGAAFKRKRGPRQADSVLSLSQLVLETCSPTGELVMQ
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaattctgggaattctgcctctgcttccaaaagcaagaaggacaagaaagaa
aagaaaaactatgaagatggagacggcaaaaagaaatttaaactcaaacggctgattcct
gatgagttggagcgtttcaccagcatgaggatgaagaaggacaaggagaagcctcatgca
gccgggcagcgccactccaacgctgcccactacgaggttcctacccaggggaccatgctg
cacgaccaccctgacgaatacgtcctggaactcttcgaacagatgctggtggatatgaac
ttgaacgaggagaagcagcggcctctgcgggcgaaagacatcgtcatcaaacgagagatg
gtgtctcagtacctccacacgtccaaagctggtcagaaccagaaggagagctccaagtca
gccatgatgtacatccaggagctgaggactgagcccagagacgcacagctcctgggctgt
ctggaatcactccgggtctccctcaacaacaaccctgtcagctgggtgcagaactttgga
gtcgagggcctggttctgctgctcaacatcatgaggaaaatccaggaggagagggacgag
tacccaaacatgggcatgaagtgtcaacacgagattgtgcgctgtctcaaagccttcatg
aacaacaagtatggtctgaaggccatgttgacgtctgccgagggcatccttcttctggtc
cgagccatcaacccccgggtccctcacatgatggtggatgtggtcaaactgctctcggcc
atctgcatcctggaacaccctgacaaccttcatgagcgtgttctggaggccatcactgag
gaggcagaaaagcaggacaatgagaggtttcagccactcctcttaggtatgaacaagccc
aacatcgccttgaagaatggctgtatgcagctcatcaacgctctcatcagtcgaggagaa
gagctggactacaggatccacatccgctcagagctgctgagactgggcctacgagacctg
ctgacggatattcggaccatagagaatgaggagctgagggtgcagctcagtgtttttgac
gaccaggccgaggatgactctgatgaactccaggcccgcctcaacgacgtgcgcatcgag
atggatgacgtgaccgaggtgttccagatcctgatgaacacggtcaaagactccaaggcc
gaaacacacttcctgtctctgatgcagcacctgctgctggttcgcaacgactacatggtc
aggccccagtactacaagctgatagatgagtgtatagctcagatcgtgttgcacaggaac
ggagccgacccagacttcaagtgccgtaatctcagcctggacgttgaggggttaattgac
aacatggtggacaagaccaaggtgcagagcagtgaggccaaggccatagagctggagaag
aagctgaatgcagagctgacggcgcgccatgagctgcaggcggagctgaagaaaatggag
ggagactatgaacatagagtccaggagctggccactgagaaggagattctgggctctgag
aagcaggcgagagagagcgagaatgagaccttactgggacagatcaacacgttcaaagaa
cagatagagacgctcaataaggatctggaggaggccaagaccagagttgtcacggtccat
gtcccagttggccctgctcctcccactgccccccctctcccagggcaagttaggatgccc
gtgccccctcctccacccctacctggacaaacattcctctctcctcccctaccagggatg
ccttgcccccctccgccaccacctctaccagggatgcccagcccccctccgccaccaccc
ctaccagggatgccagccccccctccccctcctcccctaccagggagcctgngcccccct
ccccctcctcccctaccagggatgcccggcccccctccccctcctcccctaccagggatg
cccggcccccctccccctcctccactccctggtggtcctggaatgccccctccaccccct
cctgcacctggcatgggcatgcccccgcctcctcctggtatggggggctggggagcccct
gtgccaccccctctgccctttggcctgtcgcccaagaaggagtacaagcctgaggtgcag
ctgaagcgggccaactggagcaagattggatatgaggatctgtctgagaagagtttctgg
acaaaggccaacgaggatcgctatgagaacaacgagctctttgccaaactcaccctggcc
ttctcctcccagaccaagacctccaaagctaagaaagaccaggagggagaggaggaaaag
aaaacaacccagaagaagaaggtgaaagagttgaaggtgttggactccaaatcatctcag
aacctttccatcttcctgggctcgttccgtctgccctacgaggagatcaagaacgtcatc
ctggaggtcaacgagaagctgctctctgagtccatggtgcagaatcttatcaagcagctg
cctgaacaggaaacgctaaatgttctgggtgagatgaaagatgagtatgaagacctcgca
gaggccgagcagtttggagtcgtgatgtcaacggtgaagcggctgaagcctcggctgacg
gccatcttgttccggctgcagtttgaggagcagctgaacaacatcaagccagacgtggtg
tccgtgacggcggcctgcgaggagctgaggaagagcgccaccttctcccagctgctgcag
atcatcctgctggtgggcaactacatgaacgccggttcccgcaacgccaaggccttcgga
ttcagcatcagctacctctgcaagctgcgggataccaagacggctgacctgaagcagacg
ctgctgcacttcctggctgacgtttgtcaggagcagtatcccgacgtcatgaccttccca
gacgagctcatccacgtggagaaggccagccgagtgtcggctgagactctgcagaagaac
ttggagcagatgggccgtgcgctgaagagtctggacaaagacctggagaccttccctcct
ccacagagtgacagggacatgttcatagagaaaatgaatagcttcgtgggcactgccaga
gtgcagtacgagaagttggacatgatgcataagaacatggagaagcagtactctgacctg
ggggactactttgtgttcgaccctcgcaagatttccgtcgaagagttctttggcgacctc
aacaacttcaagaacatgttccagcaagccgtgaaggagaatgcgaagaggagggaggcg
gaggagaagatcaagagagcaaagctggccagagagaaggctgacagggagaaggaggag
aaacagaagagaagccaacaactggacctcaacgaagagggtgatgagactggtatcatg
gacggcctgttggaggcgctgcagtctggtgctgccttcaagaggaagagaggcccacga
caagctgactcagtgctgtccctgtcacagctagtgctggagacctgctcgccaaccgga
gagctggtcatgcagtaa
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integrated database retrieval system
