Oncorhynchus nerka (sockeye salmon): 115130581
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Entry
115130581 CDS
T07952
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115130581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115130581
03012 Translation factors [BR:
one03012
]
115130581
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115130581
Translation factors [BR:
one03012
]
Eukaryotic type
Release factors
115130581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
115130581
NCBI-ProteinID:
XP_029517725
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All DBs
Position
LG6:complement(34620346..34629427)
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AA seq
443 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESIGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccctaacgcagcggacaggaacgtggagatatggaaaatcaagaagttg
attaaaagtttggaagctgcccgaggtaatggaaccagtatgatctcgctgatcatcccc
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttgggacagcctcc
aatatcaagagcagagtcaataggctctctgtgctcggggctattacctctgtacagcag
agactaaagctatacaataaggtgccccctaacggcctagtggtgtactgtgggaccatt
gtgacagacgagggcaaagagaagaaagtcaacatagactttgagccttttaaacccatc
aacacctctctgtacctctgtgacaacaagttccacactgaggcactgacggccctgctg
tccgatgacagtaagtttggtttcatagtgatcgatggtagcggggctctcttcgggaca
ctccaggggaacaccagagaggtgctgcacaagttcacagtggacctgcccaaaaaacac
ggcagaggaggtcagtctgctctgcggtttgcccgtctgaggatggagaagaggcataac
tatgtgaggaaggtagctgagacagctgtccagctctatgtgtctaacgacaaggtcaac
gttgctggaatggtcctagcagggtctgccgacttcaagactgagctcagccagtccgac
atgtttgaccctaggttacaggcgaagattctgaagctggtggacatctcgtacggagga
gagaatggcttcaaccaggccatcgaactgtcggcagaggtcctctccaacgtcaagttc
atccaggaaaagaagctcatagggcggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggagctgtggagatcctc
atcgtctatgagaacctggacaccatgcgttacatccttcgcctgcatggggccgagagc
atcggaacagagaacgatgagaagactctgtatttaacaccagagcaggagaaagacaag
tcccacttcacagacaaggagactgggcaggaccacgagctgattgagagcatgcctctg
ctggagtggtttgccaacaactacaagaagtttggagccacgctggagatcgtcacagac
aagagtcaagaaggctcccagtttgtcaagggctttggaggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcagaggacgatgagtttttcgattta
gatgactactag
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