Oncorhynchus nerka (sockeye salmon): 115130601
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Entry
115130601 CDS
T07952
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04210
Apoptosis
one04218
Cellular senescence
one04620
Toll-like receptor signaling pathway
one04621
NOD-like receptor signaling pathway
one04622
RIG-I-like receptor signaling pathway
one04623
Cytosolic DNA-sensing pathway
one04625
C-type lectin receptor signaling pathway
one04920
Adipocytokine signaling pathway
one05132
Salmonella infection
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115130601
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115130601
04218 Cellular senescence
115130601
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115130601
04621 NOD-like receptor signaling pathway
115130601
04622 RIG-I-like receptor signaling pathway
115130601
04623 Cytosolic DNA-sensing pathway
115130601
04625 C-type lectin receptor signaling pathway
115130601
09152 Endocrine system
04920 Adipocytokine signaling pathway
115130601
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115130601
09171 Infectious disease: bacterial
05132 Salmonella infection
115130601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115130601
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115130601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
115130601
NCBI-ProteinID:
XP_029517758
LinkDB
All DBs
Position
LG6:complement(35076962..35114512)
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AA seq
913 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFTPMSLTNSLRTADGPYLEIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVIKTLEDRMTEAYRVGYNCGIVIHPEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTVFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGAGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDCDMGDDPSSGAVVADRAQSEEDASAGETKCMLEAR
LVDVAERQAEALFHYAVTGDVHYLLAPQRHLMTAQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEGQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEEQDEGYIPGMTPLNMAATPEVLEILNGKEYKPETTIPV
FIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSY
EVSGGMVMDLLEGLRMVENSTALTVLQGALCETEQAPLAPRSTTELLGRVQDLKLDGQED
SGVCDSGVELSTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctccctcacccacagtactatgacatagagccaatatgg
gatcctctgaattttactcccatgtcactcaccaactcactccggacagcagatggaccc
tacctcgaaatcattgaacagcctaaacagcggggcttcaggttccgttatgggtgtgag
ggaccctctcacggtgggcttccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagttttcccaacctgggcatcctc
catgtgaccaagaagaatgtgattaagacactggaggaccgcatgactgaggcctacagg
gtgggctacaactgtggcattgtcatccaccccgagatagacgccatccagggagaggtt
cgcattccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagtgtggtgcgcctcatgttcacagtcttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggtg
cgcttctatgaggatgacgagacagggctgacatgggaggcttttggggacttctccccc
actgatgtccatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcctttcacctaccacccacagatcatagataaggaagaggtgcagaggaaa
agacagaagaccctgcctaatttccaggactacagcggccaaggtggagcagggggcatg
taccggggaccagggggaggaggctccgctacagggggaggacccggctcagggggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgactgcgacatgggcgatgacccgtcctctggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgctggggagacaaaatgcatgctggaggctagg
ctggtggatgtggctgagaggcaggctgaagccctcttccattacgccgtcactggagac
gtccattacctgctggctccacagcgccacctcatgacggctcaggacgagaacggcgac
actggtctccatctaggggtgatccacagccagacagacgcagtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtgataacccagcaaaaggaggcggccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacagctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggccaatagccta
tgttccctcagggacctcttggtgagcgggggcaatgtggagggccaggagaggagctgc
ggccgcacggcactccacttggccactgagctggacaacgtctccctggcaggctgcctg
ctactggaggggaatgctgatgtggactgctgcacctacaacggctccagccctctccac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagagaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggagcaggatgaaggctacatcccagggatgactcctcttaacatggctgccact
cctgaggtgttggaaattctgaatggcaaagagtacaagccagagaccaccatcccagtc
ttcatcccccctcaaggtgacatgcggagcctgggctcagacacaaagcgggcattatgc
caggcccttgagtgccagggggggagctgggagagcctggcaaacacgctggggctgggc
atcctcaacagcgccttcagactcagcccctcccccgccagcacactgctggacagctac
gaggtgtccgggggaatggtcatggaccttttggagggactcaggatggtggagaactcc
accgcattgacagtactgcagggggcactgtgtgaaacggagcaggctcctctagctccc
cgaagcaccacagagctcttaggacgtgtccaggatctgaagctggacggacaggaggac
agtggcgtgtgtgacagtggggtggagctctccacagcgtga
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