Oncorhynchus nerka (sockeye salmon): 115130627
Help
Entry
115130627 CDS
T07952
Name
(RefSeq) RNA-binding motif protein, X chromosome-like isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115130627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115130627
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
hnRNP proteins
115130627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RRM_5
RRM_PARP14_3
RBD_DEAH11
RRM_occluded
DUF7373
Motif
Other DBs
NCBI-GeneID:
115130627
NCBI-ProteinID:
XP_029517818
LinkDB
All DBs
Position
LG6:complement(35870076..35875778)
Genome browser
AA seq
385 aa
AA seq
DB search
MAEADRPGKLFIGGLDTETNEKALEKYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPPMRGRGPPRGPRGSRGAPMRGP
PSRDYYDNVGIVEPFFKGISSRGPPPLKRGPPIRNGGPPPKRHAPSPMGRPSMSRDRDPY
GPPPPRRDSMSRRDDYPSPRDEYYSTKDSYSSREYVSSRDTRDYAPTPRDYPPRDYPQSS
SRDEYGSMSRGYSDGYGGGREPKSYMERPSAASYREPYDGYGNSRSAPPSRGPQPSYNGS
GGSSRYDDYGSSSRDGYGSRESYPSSRSEPYPPSRGERMGKQERGPAPPIERGYPREAYS
GSSRGAPRGGRGGSRVDRGIARSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctgaccgaccagggaagctcttcatcggtggcctggacactgaaactaac
gagaaggcccttgagaagtacttcagcaaatatggcagaatagtagaagttctgttgatg
aaagaccgtgaaacgaacaaatcaagaggttttgcttttgtgacctttgagagtccggca
gatgcaaaggatgctgcgcgcgaaatgaatgggaagtcactggatggtaagccaataaag
gttgaacaagcaacaaaacctcagtttgagtcagcaggcagacgcggcccaccccccatg
cgtggccgcggtccccctagaggtcctagaggatctagaggagcaccaatgaggggtcca
ccatccagagactactatgataacgtagggattgtagaaccctttttcaaagggatttcg
tccagaggccctccaccactgaaaaggggacctccgattcgtaatggaggccccccaccc
aagagacatgctccttctccaatgggcagaccttccatgtctagggacagggacccctat
ggcccaccccctccccgcagggactcaatgtccagaagggatgattacccatcaccaaga
gatgaatattacagcacaaaggacagctattctagtcgggaatatgtgagttccagggat
acacgggactacgcaccaacgccacgggactatccaccaagggattatccccaatccagt
tcccgtgatgaatatgggtcaatgtcaaggggctacagtgatggttatggtggaggccgg
gaacccaaaagctatatggagcgccctagtgcagcctcttatcgagagccctacgatggt
tacggtaactcacgcagcgccccaccctcaaggggcccccaaccatcctacaatggcagt
ggcggaagcagtcgctatgacgactatggaagcagttcccgggatggatatggcagtcgt
gaaagttaccccagcagtcggagtgaaccttaccctcctagccgtggtgagcgaatgggc
aaacaggagcggggtccagcacccccaatcgagagaggctatccccgtgaagcgtacagt
ggctcaagtcgcggggcgccccgtggtggccgcggaggcagcagagtcgatagaggaatt
gcccgcagcagatactga
DBGET
integrated database retrieval system
