Oncorhynchus nerka (sockeye salmon): 115130722
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Entry
115130722 CDS
T07952
Name
(RefSeq) catenin delta-1-like isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115130722
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
115130722
NCBI-ProteinID:
XP_029517980
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Position
LG6:39473484..39515142
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AA seq
938 aa
AA seq
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MEQCESAAALLESVREQEVQFEQLTRALEEERRRVSLLSPLSRPLPHTQNGRLGDADIER
LKLSEGYINGTQYMMVDPAHGSLDESYTPEGDSQEVHSAFSDDGTNGRRVGNAMKVITSR
TVLPSDSMSIDGGVSVSGMGSYSATLDRSYRQAGGGDYPTATVPRNYHYGPAGGYDDYRS
APPSEAYASLSRGTRMDDRYRPADGYRTLDSGYRAPSRQQLDPYAAQPQVGRGVRGMGSA
LELGGMRYAHQGHYGMEDDQRSLGYDDVEYSMAPPTMHPRYGTMPRLGPGPGGLDRRRLR
SCEDTLEGDMGGVDTYTWGVNMERGSMASLDSTLRKGPPTTWRQPELPEVIAMLNYRLDP
VKTNAAAFLQHLTFKNDKVKSEVRRLKGIPSLVSLLDNPKRDVHHSACGALKNISYGPDH
DNKIAIKNCDGIPALVRLLRKARDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALSDEV
MVPHSGWERGSDGGEESLKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECAGLVDSL
MYIVQSQINRKDVDNKLVENSVCLLRNLSYQVHREVPGCERYQEAAPLNQGPATGSNKAG
CFGSRKGKDEWFSKGKKDADDGSVDQVDIPKRTMPAKGYELLFQPEVVRVYTSLLRESQN
PSVLEAAAGAVQNLCAGRWTYGRYIRATVRLEKGLPMMAELLAHGNDRVVRAMSGALRNL
AIDNRNRELLGKHAVPHLVADLPGGQSQSARPLSEETVVSVLSTLTEVLGNSLEAAKTLR
ASQGIERLVLINKDGKRSEREVRGAGQVLQLVWGHKDLRRPLEKDGWKKTDFMVNLNPIA
NGPSTRTNGTYEDTTMPLLDRGEKRDMIPLNDLGPEAYSTLDQRERRHTLDNSLNATDTL
QRGVYGGRKGSLPLLDSYDEKLIVCITQSELPLPYHCY
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtgtgagagcgctgcggctctcctggagtcggtgagggagcaggaggtgcag
tttgaacagctgaccagagcgctggaggaggagaggaggagagtgagcctgctcagcccc
ctgtcccgccccctcccccacacacagaacgggcgtctgggggatgcggacatagaacga
ctgaaactgagtgagggatacattaacgggacacagtacatgatggtggacccagcacat
ggctctctagacgagagctacacaccagaaggtgattcccaggaagtacactccgccttc
tcagacgatggaaccaatggacggcgggtagggaatgcgatgaaggtgatcacctcacgt
actgtcctgccctctgattcgatgtccattgacgggggagtttccgtctcgggtatgggc
agttacagtgccactctggaccgttcctacaggcaggctggagggggggactaccccaca
gccacggtccccaggaactaccactacggtcccgcggggggttacgacgactacaggagc
gctccgccttctgaggcctacgctagcctgagcagaggcacacgcatggacgaccgctac
agacctgcggatgggtacaggacacttgactctgggtaccgtgcccccagtagacagcag
ctggacccctacgcagcccagccccaggtggggcgaggggtgaggggcatgggaagtgcc
ctggagctggggggcatgcgctacgcccaccagggccactatggcatggaggatgaccag
aggagtctgggatatgatgatgtggagtacagtatggctcctcccaccatgcatccaaga
tacggcaccatgccacgactaggcccaggcccaggaggactggacagacgcaggctcagg
agttgtgaggacactttggaaggggacatgggaggagtcgacacctacacctggggcgtc
aacatggagagaggaagtatggcgtcattggacagcaccctgaggaagggtccgcccaca
acctggagacagccggagctccctgaggtcatcgccatgttgaactacaggctggacccg
gtcaaaaccaacgcggctgccttcctccagcacctcaccttcaagaacgacaaggtgaaa
tcggaggtgcgtcgtttaaaggggatcccctctctggtctcgttgctggacaaccccaag
agggatgtacaccactctgcttgcggggcgctcaagaacatctcgtacggaccagaccac
gacaacaagatcgccatcaagaactgtgacggcatccccgccttagtccggctactgagg
aaggccagagaccaagacctcactgacaccattacaggcacattgtggaacctatcgtct
cacgactcggtgaagatggagatcgtggaccacgctttacatgccctctcagatgaggtg
atggtgccacactctggctgggagagagggagtgacggaggggaggagagcctcaaacca
cgccacctggagtgggagacggccctcaccaacacagctggctgtctgagaaacgtgagc
tcagaacgtagtgaggccaggcggaagctgagagagtgcgcaggattggtggactcactg
atgtacattgtccaatcacagatcaaccgcaaagatgtggacaacaagttggtggagaac
agcgtttgtctgctgaggaatctgtcctatcaggttcacagagaggttcccggctgcgag
cgctaccaggaggccgcacctctaaaccagggccccgccaccggctccaacaaggccggc
tgcttcggctcacggaagggcaaagatgagtggttttccaaaggtaagaaggatgcggat
gacggtagtgtggaccaggttgatattccaaagaggacaatgcctgccaaaggctatgag
ctgctgttccagccagaggtggtgcgtgtgtacacgtcgctgctgagagagagccagaac
ccctcagtgctggaggccgcagccggggctgtacagaacctgtgtgccggacgctggact
tatggtcgctatatccgggccacggtgcgtctggagaagggcctgcccatgatggcagag
ctgctggctcatgggaacgaccgcgtggtcagagccatgtcgggagccctgaggaacctg
gccatcgacaatcgcaaccgcgagctgctcggtaagcacgctgtgccccacctggtggca
gacctgccgggtggccagagccagtcggcacgacctctgtctgaggagacggtggtgtct
gtactgagcacgctcactgaggtgctgggcaacagcctggaggccgccaagacccttagg
gcctcccaaggcatcgagagactggtactcatcaacaaggatggtaagcggtctgagcgg
gaggtgcgtggggcaggccaggtattacagctggtctgggggcacaaggatctgcggcgc
cccctggagaaggacggctggaagaagaccgacttcatggtgaacctcaaccccatcgcc
aacggcccctctacacgcaccaatgggacctacgaggacactaccatgccactgctagac
agaggggagaagagggacatgattccactgaatgacctggggcctgaagcctactctaca
ctggaccagagggagaggaggcacactttggacaactccctcaacgccacagacacttta
cagcgtggggtgtatggaggcagaaagggttcactgcctctgttggactcctacgatgaa
aaactgatagtgtgcatcacccagagtgagctgcccctgccctaccactgctactga
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