Oncorhynchus nerka (sockeye salmon): 115130784
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Entry
115130784 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115130784
04082 Neuroactive ligand signaling
115130784
04519 Cadherin signaling
115130784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115130784
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115130784
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115130784
NCBI-ProteinID:
XP_029518090
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All DBs
Position
LG6:41680658..41746615
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AA seq
454 aa
AA seq
DB search
MRNRGYMFQCLLICLTLTLLLQTKPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRITEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKAADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKSIVNDKKKEKAST
MKKNNAYAVAVANYAPNITKDSGLSTIAKGGAVEPNMAVGKGGKTDPKKTFNSVSKIDRI
SRIMFPVLFSSFNLVYWATYLNREPYIKDMVPST
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatagaggctacatgtttcaatgtctactcatctgcctcacactgacgctcctc
ttgcaaacgaagccagtgattgctgatcctacaacagatgccttcaagaacaatatcact
ctcttcacacggatccttgacagacttctagatggctatgataatcgtcttcgacccggc
cttggggatcgtataacagaggtgaatacaaatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacaccatagacgtgttcttccggcaaagctggaaagacgag
aggttaaaattcgacgggcccatgaacatactgcggctgaacaacttgatggccagtaaa
atatggacgccagacacgttcttccacaatgggaagaagtcagtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttg
acggttcacgcagagtgtccgatgcatctggaggacttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacaatgtcagaggtgacttacgtctggactagt
aaggctgccgactctgtggtggtggaaggagagagctcccgtttgaaccagtacgacctg
ctcggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggttactttgtgatccagacctatctacca
tgcattatgaccgtcatcctctcccaagtgtccttctggctgaacagagagtccgtgcca
gctaggactgtgtttggtgtaaccactgtcctgacaatgaccaccctgagtataagtgct
cgtaactccctccccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctctgccctcatcgagtttgccaccgtcaactacttcacaaagcgc
agctgggcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcctccacc
atgaagaagaacaacgcctatgccgtggcggtggccaactatgcgcccaacatcaccaag
gactctgggttgtccaccatcgccaagggcggcgccgttgaacccaacatggcggttggc
aagggtggcaaaacggacccaaagaagactttcaacagtgtgagcaaaattgataggatt
tccaggattatgttcccagtcctgtttagcagcttcaatttagtctactgggccacgtac
ctaaacagagaaccgtatataaaggatatggtgccctcaacctag
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