Oncorhynchus nerka (sockeye salmon): 115130797
Help
Entry
115130797 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115130797
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115130797
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115130797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
115130797
NCBI-ProteinID:
XP_029518105
LinkDB
All DBs
Position
LG6:complement(42151150..42235925)
Genome browser
AA seq
448 aa
AA seq
DB search
MPKRWTTATPCSYLPVVLLVLVLPRCILSIRADKTISKEDHVSATVNATVLDSKGNPKQI
LTKDDCMYGQNSPKVDAKGIVIAPAPNHGVVDRQGCDPHTRFVVPPRTGHWVALLQRGNC
TFKEKILKASAFNASAVLIYNNNSKEDTVKMGHEGTGDTVAVMITESYGKEILGLLERNL
TVLVSVVVGQHGQAKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRFTNARDRSQVG
HRRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEGYQLNDVVRILPCKHVFHKL
CVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNVGFDMDHRIGRSQTMASQRTALVDLS
SETSISLEPLQQGHPGTGPQIPSESGELTPRTGEINIAVTKEWFIIASFGLLSTLTLCFM
IIKATASFSSPEWPLLQPELPVPTQFGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggtggaccacagcaacgccatgcagctatctcccggtcgtcttgttggtg
ctcgttctgcccagatgtatactgtcgatccgtgccgacaaaaccatcagcaaggaagac
catgttagtgctacggtcaatgccaccgtacttgactcaaaaggcaatcctaaacaaatt
ctaaccaaggacgattgcatgtacggacagaattcaccgaaagtggacgcgaaaggaatc
gtgattgcacctgcaccgaatcatggagtggtggaccgccagggctgcgacccccacact
cgcttcgtggtgcctccccggacggggcactgggtggccctgctgcagcgcggcaactgc
accttcaaggagaagatcctcaaggcctcggccttcaacgcctccgccgtgctcatctac
aacaacaactccaaggaggacaccgtcaagatgggccacgaaggtactggcgacacggtg
gcagtgatgatcaccgagtcttacggcaaggagatcctgggtctgctggagaggaacctg
acggtgctggtgagtgtggtggtgggccaacacggccaggccaagaacatcaaccgtggc
tccctggtcttcgtctccatctccttcatcgtactcatgatcatctcctctgcctggctc
atcttctacttcatccagaagatccgctttacgaacgcacgtgaccgcagccaggtagga
catagacgtcgacttggagatgctgctaagaaagccatagggaagctgacaaccaggacc
gtgaagaaaggggacaaggaaacagacccggacttcaaccactgcgccgtgtgcatcgag
ggataccagctcaacgacgtggtccgcatcctgccctgcaaacatgtcttccataagctg
tgtgtggacccctggctgaatgagcactgtacgtgtcccatgtgtaaactgaacatcctc
aaagctctgggcatcatgcccaacctgccgtgtgtggacaacgtcggcttcgacatggac
cacaggataggacgcagccagacgatggccagccagcggacagccctggtggacctgtcc
agtgagacatccatcagcctggagcccctacagcaaggccaccccggcactggaccccag
ataccctcagagagcggagagctcaccccccgcaccggagagatcaacatcgccgtcacc
aaggagtggtttataatcgccagcttcggccttctcagcactctcactctgtgctttatg
atcatcaaggccacagccagcttctccagccctgagtggccacttcttcaaccggaactc
cctgtccccactcagtttggtctgtga
DBGET
integrated database retrieval system
