Oncorhynchus nerka (sockeye salmon): 115130798
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Entry
115130798 CDS
T07952
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115130798
Membrane trafficking [BR:
one04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115130798
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
Ig_2
LRR_9
V-set
LRRNT
LRR_Zer-1
Big_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
115130798
NCBI-ProteinID:
XP_029518111
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All DBs
Position
LG6:complement(42410819..42731648)
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AA seq
611 aa
AA seq
DB search
MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPLGVFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLQTLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLQAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHSLNLTTLFITNTNLSTFPYQALKHLHYLTHLNLSFNRIRHIEGGM
LFELVRLRELHLVGAQLSTIEPYAFQGLRWLKVLNVSHNHLNTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQKWHSIFFGDSQPECSTPEGRPFREFKETLLSYYVTCTKPKIREN
KTQTIAVDEGQSAKLHCSAEGIPRPVVSWLSPRRRLLTNKSYGRVKVHNNGTLEIKVAEV
QDGGVYLCMATNTAGNDSLMASLAVKSLGSLYANRTQYYTDPSNATTNGTSNVTYGLDLK
TILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSVDGGAEGQ
AGPHRFNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagcaaagtcatgctgcacacagccctctcatgctggcaaccgttc
ctgggactggctctagtggccgtctttgtgggttctgccctgggatgtcccgcccgctgt
gactgctcagcccagagcaagtcggtcctgtgccaccgcaaacgcctaccgagcatccca
gacggcatccccatcgagaccaggatcctggacctgagcaagaacaagctgcaggccgtc
aacccggacgactttgccccctaccctggactagaggatctggacctcagtgggaacatt
atcagctatgtggagccgggggccttcaaccctctgtacagcatgcactctctcagtctc
aaaagcaaccgcatcaagcttattcccctgggggtcttcacaggcttatccaacctcaca
cggctggatgtcagcgacaacaagatcgtcatcctgctggactacatgttccaggacttg
cacaacctgaagttcctggaggtgggtgacaatgacctggtgtacatctcccaccgggcc
ttcagtggactgctgagcctacagacactaaccctggagagatgcaacctgacggtggtg
cctactgaggccctgtcccatctgcacaacttggtcagacttcacctccgatacctcagc
atcagcacattgcaagcatactccttcaagaagcttttccggctgcgccacctggagatt
gacagctggacctcgctggacagtgtgcctgccaacacactacacagcctcaacctgacc
acgcttttcatcaccaacactaacctgtccaccttcccataccaggccctaaagcacctg
cactacctaacacacctcaacctgtccttcaaccgcatcagacacatcgaggggggaatg
ctgtttgagttggtgcgcctgagggaacttcatctagttggggcccagttgtcgaccatt
gaaccgtacgcatttcagggcctccggtggctcaaagtcctcaacgtctctcacaaccat
ttgaacacgctggagaaaggtgtcttccaagcccctgaggctctagaggtcctcttgatc
gacgacaaccccctggtgtgcgactgtcgcctcatgtggatcctgcagaaatggcactcc
atcttctttggtgactcgcagccagagtgcagcacccctgagggtaggcctttcagggaa
ttcaaggagaccctgctatcctattacgtgacatgcaccaagccaaaaatccgggagaac
aagacacagacgatagcagtggacgagggccagtcagcgaaactacactgcagtgctgaa
ggcatccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctcaccaacaag
agctacggtagagtcaaagtccacaacaatgggacgctggagatcaaggtggccgaggtg
caggatggtggcgtgtacctttgcatggcaaccaacacggcgggtaacgactcattgatg
gcctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccagtactacaca
gatcccagcaatgccactaccaatgggactagcaacgtgacctacggcttggacctaaag
actatcttagtgtcgacagcaatgggatgtttcacattcctgggggtggtcttgttctgc
tttctgctactgttcgtttggagccggggcaagggaaagcataaaaacaacatagatatt
gaatatgttcctcggtccaagtctaatggcacctctgtagatggaggagcagagggacaa
gctggacctcatcgctttaacatgaaaatgatctaa
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