Oncorhynchus nerka (sockeye salmon): 115130813
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Entry
115130813 CDS
T07952
Name
(RefSeq) platelet-derived growth factor C-like
KO
K05450
platelet derived growth factor C/D
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04510
Focal adhesion
one04540
Gap junction
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115130813
04020 Calcium signaling pathway
115130813
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115130813
04540 Gap junction
115130813
09142 Cell motility
04810 Regulation of actin cytoskeleton
115130813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115130813
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Growth factors (RTK binding)
115130813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
115130813
NCBI-ProteinID:
XP_029518135
LinkDB
All DBs
Position
LG6:complement(43764265..43833946)
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AA seq
359 aa
AA seq
DB search
MVILNVSSTVFCNRCPPLIQMILPLLILFVSLLQQHGSEAESSHVSKFQQPSLKEQNGVQ
DFQHEKIITVVGEGMIHSPDFPFTYPRSTVLVWRLMASSDNMRIHLSFDERFGLEDSEDG
ICKYDFVEIDEPSENTILGRWCGSQVPASHTSKGSQIRVRFISDEYFPSEPGFSIRYSLL
PMSVLKPEVTPAPSLQSSDALSEAVAGLSTVEEVMMYLEPERWQQDMEDLYKPTWHILGR
SFLHNKKSRGVDLNLLREEVKLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCA
CCSHRCFDCQCVPTRVVNKYHEVLLLKHRSGGRGLQKSMTDVPMEHHEECACVCKDDWD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactaaacgtctcgtcaacagtgttttgtaatcgctgtccgccactaatccaa
atgatccttccattattaatcctgtttgtatcgcttctccaacaacatggctcagaagct
gaatcaagtcatgtcagcaaattccaacaaccaagtttaaaggaacaaaacggtgtccaa
gatttccagcatgagaagataatcacagtcgtaggagagggaatgatccatagtccagac
ttcccatttacctaccccaggagtaccgtgctggtctggagactgatggcctccagtgac
aacatgagaatccacttgtccttcgacgagaggttcggcctggaagactcagaggacgga
atatgcaagtatgattttgtggagatcgatgagccatctgagaacaccattctgggccgc
tggtgcgggtcacaggtacccgccagtcacacatccaaaggcagtcagatccgggtgcga
tttatctccgacgagtacttcccctccgagcccggattcagcattcgctactccctgctc
ccaatgagtgtattgaagcccgaggtaactccagctccatctctgcagagctcagatgcg
ttgtctgaggctgtggctgggctcagcaccgtggaggaggtcatgatgtatctggagccc
gagagatggcagcaggacatggaagacctgtacaagcccacttggcacatcctgggaagg
tcattcctacacaacaagaaatctagaggggtggatctcaacctgttgagagaagaggtg
aaactgtacagctgcacgccgcgcaacttctccgtctccctaagggaggagctcaagagg
acggacgccatcttctggcctagttgcctcctggtgaagcgctgcgggggtaactgtgcc
tgctgctcgcaccgctgcttcgactgccagtgtgtgcccacccgggtagtcaacaagtac
catgaggttctcctgctgaagcaccgaagcgggggccgaggcctgcagaagtccatgacc
gatgtgccaatggaacaccacgaggagtgtgcctgtgtgtgcaaagatgactgggactga
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