Oncorhynchus nerka (sockeye salmon): 115130874
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Entry
115130874 CDS
T07952
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115130874
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115130874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
115130874
NCBI-ProteinID:
XP_029518285
LinkDB
All DBs
Position
LG6:complement(48091078..48133689)
Genome browser
AA seq
2182 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSPLPANPAEVDTAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKVRPGEDELLKLLLPLLLQYSGEFVLSAYLSRRLAYF
CTRRLNLLLSDGSLGPGSGGHPAHSILAQPGNTLPPTPTSQPTGGNQPQTPFTDFYICPQ
HRPLVFGLSCMLQSIVLCCPSALVWHYSLTDSRNKTGSPLDLLPISPSNLPMPGGNSTFT
QQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQSKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPMLTEAGNESERVEFS
NLVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEQDAGSS
VKNEDTGLSELMEIDHNSSANFDEMFSPPTHCESKGSPSPEKPAPEQEGKGACKDKALDP
AFPLVYEQPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILK
VLNRKSTAETGGEEGQKRKRTKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGS
YTTGLCLCIVAVLRRYHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYD
LYTSCCHLKSKFGEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHS
MVGKILNDSPANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLK
ALCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQRNPCPQDGAKSDKSSVGIRSSCDRHLLAASQNS
IVVGAVFAVLKAVFMLGDAELKGSGFSHPAALDDIAEDDMGSKKSGGRTVSIETASLDVY
AKYVLKSICQQEWVGERCLRSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDN
PQRQRIKHILQNMDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAEMNS
TNLSGNGSAGAGGSASNSNNPSKKPVLSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEE
LEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQI
VTNWREDQYQDDCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTV
DMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSE
SLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDVFEGL
KHSAPLSWGWFGTVRVDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEDEEPPTP
APQEPEKKMAEPVKPEKSVPAVSSDSTKKKTKKKKTQSTNKTEDYVTRTQGGLPYGTCIP
PDPLMGQQAHPYSRIGYNQQPMGMYAQNQPLPPGGPGLDTPYRPARNPQMGKMMPTRPSY
PGMMPGMQGGMPGMMGMDKQYPMGYKPQPNIPQGQILRQQLQVRLNQSMIGPQMRQMTPN
QQYSSMQPSQNISQGYTTYGSHIGMQPHPSQAGGIVPPSYGNQGFQGSHPGANPAVVDSL
RQRPSGYVHQQAPGYSHTMQNTPRFPHQSIQPAPVMQPLSHMGVHPGMRPNQMLAEQQQQ
QQAQQQQQQQQQQAQQQQQQQQAQQQQQQQQAQQQQQQQQAQQQVQQQQVQQQQQQQQVQ
PQQVQQQQQQQQQQQQVASAQPPGTQAQNQALGMQQPMFPRQGMQQTQMQQTQQQQQTAA
LVRQLQQQLSNTQPGQNTNSYY
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctttcgggatcttaagttacgaacaccggcccctgaagcggccacgactc
ggacctccggacgtttatccccaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaacctgctgtgtctggggatgaacatggaagtgct
aaaaatgtcaacttcaatccctcaaagattagttcaaacttcagcagcatcattgcagag
aagttgcgctacaacacatttccagacacaggcaaacggaagcctcaggtcaaccagaag
gacaatttctggctcgttactgccaggtcacagagctctatcaacaactggtttacagac
ttggctgggactaaacccctcacccagctggccaagaaggtgccgatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacctgtgatgcgttcggcatggatg
atcaagatgacctgtgcgtatcacgccgctatcacagaaacaaaagtcaagaagcggcac
gtgattgacccctgcatagaatggactcagatcatcactaagtacctgtgggagcagttg
cagaaggtggccgagttctaccgccagtctcccagccagggctgtggctcccccctcccg
gccaatccggccgaggtggacacggccatgaagcagtgggagtacaacgagaagctggcc
atgttcatgttccaggatggcatgctagatagacacgagttcctgacgtgggtgttggaa
tgcttcgagaaagtccgacctggagaggatgagcttctgaagctgctgctgcccctcctg
ctacagtactcaggggagttcgtgctgtcggcctacctgtctcggagactggcctacttc
tgcacgcgacgtctcaacctgctgctaagcgacgggagcctgggacccggctccgggggg
cacccggcacacagcatcctggcacagccggggaacaccctgccccccacacccacctcc
cagcccacggggggcaaccaaccccagacccccttcacagacttctacatctgccctcaa
cacaggcccttggtgtttgggctcagctgcatgctacagagtatcgtgctgtgctgtccc
agtgccctggtgtggcactactctctgacagacagccggaacaagactggttccccactg
gacctactccccatatccccgtccaacctgcccatgccagggggcaacagcacctttaca
cagcaggtccgtgcaaaggtcagagaaatagaggagcaggtcaaggacagagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattgga
agggtcctacacaccctggaggttctagacaaccacagttttgagaagtcagacttcagc
aactccctggattccctttacaaccgcatcttcggctcgggccagagcaaagacggccac
gagatgtcccctgatgacgatgccgtggtgaccctgctgtgtgagtgggcggtgtgctgc
aagaggtctggccgtcacagggccatggtggtggccaagctgctggagaagagacaggca
gagatcgaagccgagagatgcggcgagtcggaggtggtggatgagaaaggctcagtttca
tcaggatctctctcggcggccaccctgcctgtgtttcaagacgtgctcctgcagttcctg
gacacccaggcccccatgctcacggaggcaggcaacgagagcgagcgtgtggagttctct
aacctggtgctgctcttctgcgagctcatccgccacgacgtcttctctcacaacatctac
atgtgcacgctcatctcccgcggtgacctggcctctgactctcacctgccccgcccccgt
tctcctagtgatgagccttcagacgaatcagagcgcaaggagcaggatgcaggcagcagc
gtcaagaacgaggacactggtctttctgagttaatggagatcgatcacaactcgagcgct
aatttcgatgagatgttttctccccccactcactgtgagtcaaagggcagcccctctccc
gagaaacctgccccggaacaggaagggaagggcgcctgcaaagacaaggccctggatcct
gccttcccattggtgtacgagcaaccccgccacatccaatacgctacccacttccccatc
ccccaggaggagagtgccagtcacgagtgtaaccagcgactggtggtgctctacggcgtg
ggcaagcagcgagacgaagcgaggcacgccatcaagaaaatcaccaaagacatcttgaag
gtgctcaaccgcaaaagcacagcagagaccggaggagaggaaggacagaagaggaagagg
actaagcctgaagccttccccacagcagaggacatcttctccaaattccagcacctctcc
cattttgatcagcaccaggtcacctctcaagtgtccaggaatgttctggaacagatcacc
agctttgccttagggatgtcctatcacctgcccctggtccagcacatccagttcatcttt
gacctcatggagtactcccttaacattagtggcctcatcgactttgccattcagctgctg
aatgagctgagcctggtggaggcagagctgctgctcaagtcatccagtctggtgggtagc
tataccacaggtctgtgtctgtgcatcgtggccgtgctgaggaggtaccattcctgcctc
atcctcaacccagagcagacggcacaggtctttgacgggttacgcatcgtggtgaagtcg
ggggtgaacccagccgactgctcctcagccgagcgctgcatcctggcctacctgtacgac
ctctatacctcctgctgtcacctaaagagcaagtttggagagatcttcagtgagttctgc
tccaaggtgaagaactccatatactgtaacatcgatccgtctgactccaacatgctgtgg
gaccctgtgttcatgatggaggccatcgccaatccgtcggcccacaatttcaaccacagc
atggtgggtaagatcctcaatgacagccccgccaaccgctacagcttcgtctgcaacgtg
cttatggacgtgtgcgtggaccacagggaccccgagagggtgaatgacattgggatccta
tgtgcggagctgactgcctactgtcgctctctgagtgctgagtggctgggcgtcctcaaa
gccctctgctgctcctccaacaacggcaactgtggcttcaacgacctcctgtgcaacgtg
gacgtcagcgatctctccttccatgactctctggccacctttgtagccatcctcattgcc
cgacagtgtcttcttctggaggacctggtccgctgcgtagccatcccctccctcctcaac
gctgcctgcagtgagcaggactctgagcccggagcccgtctgacctgcaggatcctgctg
cacctcttcaagaccccccagcgcaacccctgcccccaggatggagccaagtcagataaa
tcttctgttgggatccggtcgtcgtgtgaccgtcaccttctggctgcctcacagaacagc
atagtggttggagctgtttttgctgtcctaaaggccgtctttatgctgggcgatgcagaa
ctgaagggatcgggattctctcaccccgccgccctcgatgacatcgctgaagacgacatg
ggttccaagaagtcgggcggccgcaccgtctccatagaaacggccagcctggacgtgtac
gccaagtatgtgctgaagagcatctgccaacaggagtgggtgggcgagcgctgtctcagg
tccctgtcggaggacagcagtgccctgcaggacccggtgctggttaacatccaggcccag
cggttgctgcagctcatctgctacccccaccgccagctggacagtgaggagggggacaac
ccccagaggcagcgcatcaaacacatcctccagaacatggaccagtggaccatgagacag
tcatccctggagctgcagcttatgatcaagcagagtactaacaacgagctgtactcctta
ttggagaacatcgccaaggccactatcgaggtgttccagaagtcagcggagatgaactcc
accaacctctcagggaacgggtcagccggcgccggaggttctgcctccaacagcaacaac
ccaagcaagaaaccagtgttgagttcgtctgagcggtctggtgtgtggctggtggcgcca
ctgatagccaagctgcccacctcggtccagggccacgtcctgaaggcggcaggggaggag
ctagagaagggccagcatctggggtcctcttcacgcaaggagagagaccggcagaaacag
aagagcatgtctctgctgagccagcagcccttcctgtctctggtgctgacctgtctaaaa
ggccaggatgagcagagggagggcctcctcacttccctctacagccaggtgcagcagatt
gtaacgaactggcgggaagaccagtaccaggacgactgcaaggccaagcagatgatgcat
gaggcgctgaagctgcggcttaatctggtgggtgggatgtttgacacggtacaacgcagt
acacagcagaccacggagtgggccgtgctactcctcgacataattagtagcggtacagtg
gacatgcagtccaacaatgagctcttcaccacggtactagacatgctgagtgtgctaatt
aatggcacgctggctgctgacatgtctagcatctctcagggcagcatggaggagaacaag
agggcttatatgaacctggtcaagaagctccggaaagagctcggtgaccggcagtcagag
agtctggagaaggtgcggcagctgctccctctgcccaagcagacccgtgatgtcatcacg
tgtgaaccacagggctcgcttattgacaccaagggaaacaagatcgctggctttgagaag
gagggtctccaagtgtcgaccaagcagaagatctctccgtgggatgtgttcgagggcctc
aagcactcggcccctctctcctggggctggtttggtacggtgcgcgtggaccgtaaggtg
accaagttcgaagaacagcagcgcttcctcctctaccacacccacctgaagcccaagccg
cgcagttactatctggagcccctccccctgccccctgaggatgaggagccgcccacgccc
gcgccccaggaacccgagaagaagatggcagagccagtgaagccggagaagagcgtccct
gcggtgtcgtccgattctaccaaaaagaagaccaagaagaagaagacacagtccaccaac
aagacggaggactatgtgacccgtacccagggtggactgccgtatgggacgtgtataccc
ccagaccccctcatgggccagcaggcccacccctacagcaggataggctacaaccagcag
cccatgggcatgtatgcccagaaccagcctctgcctccaggaggccctggtttggacacc
ccgtaccgaccagcccggaaccctcaaatgggcaagatgatgcccacgcggcccagctac
ccaggcatgatgcccggcatgcaaggtggcatgccaggcatgatgggcatggacaagcag
tacccgatgggctacaagccccaacccaacattccgcagggtcagattctgcgccagcag
ctacaggtcagactgaaccagagtatgataggaccacagatgaggcagatgacgcctaac
caacaatacagctccatgcagccaagccagaacatctcccagggatataccacgtacggc
tcccacattgggatgcagccacacccctctcaggcgggtggtatagtccctccatcatat
gggaaccagggcttccagggcagccacccgggggccaacccggccgtggtggactctctg
aggcagaggcccagcggctatgttcaccagcaggcaccgggctactcacacaccatgcag
aacacaccaaggtttccccaccagtccatccagccagctcccgtcatgcagcccttgagc
cacatgggggtccacccgggcatgagaccaaaccagatgctggccgagcagcagcagcaa
cagcaggctcagcaacaacaacagcagcagcagcagcaggctcagcaacaacaacagcag
cagcaggctcagcaacaacaacagcagcagcaggctcagcaacaacaacagcagcagcag
gctcagcaacaggttcagcagcagcaggttcagcagcagcagcagcagcaacaggtccag
ccccaacaagttcaacaacaacagcagcagcaacaacaacaacagcaggtagcgtcagcc
cagccccccggtacccaggctcagaaccaggccctgggcatgcagcaacccatgttccca
cgacaggggatgcagcagactcagatgcagcagactcaacagcagcagcagaccgcagca
ctggtcaggcagctccaacaacaactctcaaatacacaacccggacaaaacaccaactca
tattactga
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integrated database retrieval system
